Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox3P53784 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.81■□□□□ 0.6
Sox3P53784 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Sox3P53784 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox3P53784 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sox3P53784 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox3P53784 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox3P53784 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sox3P53784 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox3P53784 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox3P53784 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.8■□□□□ 0.6
Sox3P53784 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox3P53784 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox3P53784 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Sox3P53784 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox3P53784 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox3P53784 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Sox3P53784 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.8■□□□□ 0.6
Sox3P53784 Gm10033-202ENSMUST00000211874 928 ntBASIC18.8■□□□□ 0.6
Sox3P53784 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox3P53784 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox3P53784 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox3P53784 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Sox3P53784 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox3P53784 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sox3P53784 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox3P53784 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox3P53784 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox3P53784 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Sox3P53784 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Sox3P53784 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox3P53784 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox3P53784 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.79■□□□□ 0.6
Sox3P53784 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox3P53784 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.79■□□□□ 0.6
Sox3P53784 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox3P53784 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox3P53784 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox3P53784 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.78■□□□□ 0.6
Sox3P53784 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox3P53784 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox3P53784 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Sox3P53784 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sox3P53784 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Sox3P53784 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Sox3P53784 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox3P53784 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox3P53784 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.78■□□□□ 0.6
Sox3P53784 AV356131-201ENSMUST00000206201 750 ntBASIC18.78■□□□□ 0.6
Sox3P53784 Gm18671-201ENSMUST00000214826 683 ntBASIC18.78■□□□□ 0.6
Sox3P53784 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox3P53784 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Sox3P53784 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox3P53784 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Sox3P53784 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Sox3P53784 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox3P53784 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Sox3P53784 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sox3P53784 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox3P53784 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.77■□□□□ 0.6
Sox3P53784 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.77■□□□□ 0.6
Sox3P53784 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.77■□□□□ 0.6
Sox3P53784 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Sox3P53784 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.77■□□□□ 0.6
Sox3P53784 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox3P53784 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox3P53784 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sox3P53784 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Sox3P53784 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Sox3P53784 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox3P53784 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox3P53784 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Sox3P53784 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sox3P53784 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox3P53784 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.76■□□□□ 0.59
Sox3P53784 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox3P53784 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sox3P53784 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.76■□□□□ 0.59
Sox3P53784 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox3P53784 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox3P53784 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Sox3P53784 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Sox3P53784 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.76■□□□□ 0.59
Sox3P53784 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox3P53784 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.75■□□□□ 0.59
Sox3P53784 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox3P53784 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox3P53784 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.75■□□□□ 0.59
Sox3P53784 Gm10602-201ENSMUST00000098239 609 ntBASIC18.75■□□□□ 0.59
Sox3P53784 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Sox3P53784 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
Sox3P53784 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.75■□□□□ 0.59
Sox3P53784 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox3P53784 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox3P53784 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sox3P53784 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox3P53784 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox3P53784 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox3P53784 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sox3P53784 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms