Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pdx1P52946 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pdx1P52946 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pdx1P52946 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Pdx1P52946 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdx1P52946 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdx1P52946 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Pdx1P52946 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Pdx1P52946 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Pdx1P52946 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdx1P52946 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.54■□□□□ 0.72
Pdx1P52946 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Pdx1P52946 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pdx1P52946 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdx1P52946 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdx1P52946 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pdx1P52946 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pdx1P52946 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.53■□□□□ 0.72
Pdx1P52946 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pdx1P52946 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pdx1P52946 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pdx1P52946 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pdx1P52946 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdx1P52946 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdx1P52946 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdx1P52946 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.52■□□□□ 0.72
Pdx1P52946 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Pdx1P52946 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdx1P52946 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pdx1P52946 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pdx1P52946 Mir7075-201ENSMUST00000184187 82 ntBASIC19.52■□□□□ 0.72
Pdx1P52946 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.52■□□□□ 0.72
Pdx1P52946 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.52■□□□□ 0.72
Pdx1P52946 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.52■□□□□ 0.72
Pdx1P52946 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdx1P52946 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdx1P52946 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdx1P52946 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pdx1P52946 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pdx1P52946 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdx1P52946 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdx1P52946 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdx1P52946 Spcs1-204ENSMUST00000226782 949 ntBASIC19.51■□□□□ 0.71
Pdx1P52946 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Pdx1P52946 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Pdx1P52946 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Pdx1P52946 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdx1P52946 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pdx1P52946 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Pdx1P52946 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Pdx1P52946 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.51■□□□□ 0.71
Pdx1P52946 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.51■□□□□ 0.71
Pdx1P52946 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdx1P52946 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pdx1P52946 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pdx1P52946 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pdx1P52946 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pdx1P52946 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pdx1P52946 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Pdx1P52946 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pdx1P52946 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pdx1P52946 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.49■□□□□ 0.71
Pdx1P52946 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.49■□□□□ 0.71
Pdx1P52946 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pdx1P52946 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pdx1P52946 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.49■□□□□ 0.71
Pdx1P52946 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pdx1P52946 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Pdx1P52946 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pdx1P52946 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pdx1P52946 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.49■□□□□ 0.71
Pdx1P52946 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pdx1P52946 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pdx1P52946 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pdx1P52946 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pdx1P52946 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pdx1P52946 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Pdx1P52946 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pdx1P52946 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pdx1P52946 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pdx1P52946 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pdx1P52946 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.47■□□□□ 0.71
Pdx1P52946 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Pdx1P52946 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pdx1P52946 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pdx1P52946 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Pdx1P52946 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.47■□□□□ 0.71
Pdx1P52946 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.47■□□□□ 0.71
Pdx1P52946 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pdx1P52946 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.47■□□□□ 0.71
Pdx1P52946 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pdx1P52946 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pdx1P52946 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pdx1P52946 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.46■□□□□ 0.71
Pdx1P52946 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pdx1P52946 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pdx1P52946 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pdx1P52946 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.46■□□□□ 0.71
Pdx1P52946 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.46■□□□□ 0.71
Pdx1P52946 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms