Protein–RNA interactions for Protein: P51944

Ccnf, Cyclin-F, mousemouse

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnfP51944 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CcnfP51944 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CcnfP51944 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CcnfP51944 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CcnfP51944 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CcnfP51944 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CcnfP51944 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CcnfP51944 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CcnfP51944 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CcnfP51944 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CcnfP51944 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CcnfP51944 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CcnfP51944 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CcnfP51944 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CcnfP51944 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CcnfP51944 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CcnfP51944 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CcnfP51944 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CcnfP51944 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CcnfP51944 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CcnfP51944 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CcnfP51944 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CcnfP51944 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CcnfP51944 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CcnfP51944 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.78■□□□□ 0.6
CcnfP51944 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.78■□□□□ 0.6
CcnfP51944 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CcnfP51944 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CcnfP51944 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CcnfP51944 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CcnfP51944 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CcnfP51944 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CcnfP51944 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CcnfP51944 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CcnfP51944 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CcnfP51944 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.77■□□□□ 0.6
CcnfP51944 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CcnfP51944 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CcnfP51944 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.77■□□□□ 0.6
CcnfP51944 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CcnfP51944 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CcnfP51944 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CcnfP51944 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CcnfP51944 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CcnfP51944 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CcnfP51944 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CcnfP51944 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CcnfP51944 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CcnfP51944 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CcnfP51944 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CcnfP51944 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CcnfP51944 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CcnfP51944 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CcnfP51944 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.76■□□□□ 0.59
CcnfP51944 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CcnfP51944 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CcnfP51944 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CcnfP51944 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CcnfP51944 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CcnfP51944 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CcnfP51944 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CcnfP51944 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CcnfP51944 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CcnfP51944 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CcnfP51944 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CcnfP51944 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CcnfP51944 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
CcnfP51944 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CcnfP51944 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CcnfP51944 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CcnfP51944 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CcnfP51944 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.75■□□□□ 0.59
CcnfP51944 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CcnfP51944 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CcnfP51944 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CcnfP51944 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CcnfP51944 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CcnfP51944 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CcnfP51944 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.74■□□□□ 0.59
CcnfP51944 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.74■□□□□ 0.59
CcnfP51944 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CcnfP51944 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CcnfP51944 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CcnfP51944 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CcnfP51944 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CcnfP51944 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CcnfP51944 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CcnfP51944 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CcnfP51944 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CcnfP51944 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.73■□□□□ 0.59
CcnfP51944 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CcnfP51944 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CcnfP51944 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CcnfP51944 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CcnfP51944 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CcnfP51944 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CcnfP51944 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CcnfP51944 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CcnfP51944 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CcnfP51944 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms