Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.64■□□□□ 0.57
RoraP51448 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RoraP51448 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RoraP51448 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RoraP51448 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
RoraP51448 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RoraP51448 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RoraP51448 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
RoraP51448 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RoraP51448 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RoraP51448 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RoraP51448 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.63■□□□□ 0.57
RoraP51448 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RoraP51448 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RoraP51448 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RoraP51448 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
RoraP51448 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.62■□□□□ 0.57
RoraP51448 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RoraP51448 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.62■□□□□ 0.57
RoraP51448 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RoraP51448 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RoraP51448 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RoraP51448 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RoraP51448 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RoraP51448 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RoraP51448 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RoraP51448 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RoraP51448 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RoraP51448 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RoraP51448 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
RoraP51448 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RoraP51448 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.61■□□□□ 0.57
RoraP51448 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RoraP51448 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RoraP51448 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RoraP51448 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RoraP51448 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RoraP51448 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RoraP51448 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.6■□□□□ 0.57
RoraP51448 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.6■□□□□ 0.57
RoraP51448 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RoraP51448 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RoraP51448 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.6■□□□□ 0.57
RoraP51448 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RoraP51448 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RoraP51448 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RoraP51448 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.59■□□□□ 0.57
RoraP51448 Gm11421-201ENSMUST00000122124 294 ntBASIC18.59■□□□□ 0.57
RoraP51448 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RoraP51448 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RoraP51448 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
RoraP51448 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RoraP51448 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RoraP51448 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RoraP51448 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RoraP51448 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RoraP51448 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RoraP51448 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RoraP51448 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.57■□□□□ 0.56
RoraP51448 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RoraP51448 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RoraP51448 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RoraP51448 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
RoraP51448 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RoraP51448 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RoraP51448 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RoraP51448 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.56■□□□□ 0.56
RoraP51448 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RoraP51448 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RoraP51448 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.56■□□□□ 0.56
RoraP51448 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.56■□□□□ 0.56
RoraP51448 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.56■□□□□ 0.56
RoraP51448 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RoraP51448 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RoraP51448 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RoraP51448 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.56■□□□□ 0.56
RoraP51448 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RoraP51448 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RoraP51448 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RoraP51448 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RoraP51448 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RoraP51448 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RoraP51448 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RoraP51448 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.55■□□□□ 0.56
RoraP51448 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RoraP51448 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RoraP51448 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RoraP51448 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RoraP51448 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RoraP51448 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.55■□□□□ 0.56
RoraP51448 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
RoraP51448 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RoraP51448 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RoraP51448 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RoraP51448 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RoraP51448 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RoraP51448 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RoraP51448 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RoraP51448 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RoraP51448 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms