Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.96■□□□□ 0.79
Vps4bP46467 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Vps4bP46467 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
Vps4bP46467 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps4bP46467 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps4bP46467 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Vps4bP46467 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Vps4bP46467 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps4bP46467 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps4bP46467 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Vps4bP46467 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps4bP46467 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vps4bP46467 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vps4bP46467 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Vps4bP46467 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vps4bP46467 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Vps4bP46467 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vps4bP46467 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.95■□□□□ 0.78
Vps4bP46467 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vps4bP46467 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.95■□□□□ 0.78
Vps4bP46467 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Vps4bP46467 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Vps4bP46467 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vps4bP46467 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vps4bP46467 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vps4bP46467 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vps4bP46467 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vps4bP46467 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vps4bP46467 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vps4bP46467 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps4bP46467 Golph3-202ENSMUST00000226517 2359 ntBASIC19.93■□□□□ 0.78
Vps4bP46467 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps4bP46467 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.93■□□□□ 0.78
Vps4bP46467 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.93■□□□□ 0.78
Vps4bP46467 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
Vps4bP46467 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps4bP46467 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Vps4bP46467 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps4bP46467 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Vps4bP46467 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps4bP46467 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Vps4bP46467 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.92■□□□□ 0.78
Vps4bP46467 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps4bP46467 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps4bP46467 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Vps4bP46467 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps4bP46467 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.92■□□□□ 0.78
Vps4bP46467 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps4bP46467 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps4bP46467 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.92■□□□□ 0.78
Vps4bP46467 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.92■□□□□ 0.78
Vps4bP46467 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.92■□□□□ 0.78
Vps4bP46467 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.92■□□□□ 0.78
Vps4bP46467 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.92■□□□□ 0.78
Vps4bP46467 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps4bP46467 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps4bP46467 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps4bP46467 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps4bP46467 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.92■□□□□ 0.78
Vps4bP46467 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps4bP46467 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps4bP46467 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Vps4bP46467 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps4bP46467 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps4bP46467 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vps4bP46467 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.91■□□□□ 0.78
Vps4bP46467 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Vps4bP46467 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Vps4bP46467 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vps4bP46467 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Vps4bP46467 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Vps4bP46467 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps4bP46467 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps4bP46467 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps4bP46467 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Vps4bP46467 Gm22238-201ENSMUST00000175222 88 ntBASIC19.9■□□□□ 0.78
Vps4bP46467 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps4bP46467 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps4bP46467 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps4bP46467 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps4bP46467 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Vps4bP46467 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Vps4bP46467 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Vps4bP46467 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Vps4bP46467 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Vps4bP46467 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps4bP46467 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps4bP46467 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps4bP46467 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Vps4bP46467 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Vps4bP46467 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps4bP46467 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps4bP46467 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps4bP46467 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps4bP46467 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Vps4bP46467 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Vps4bP46467 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Vps4bP46467 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps4bP46467 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Vps4bP46467 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms