Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HttP42859 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HttP42859 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC21.6■■□□□ 1.05
HttP42859 Gm6420-201ENSMUST00000193885 723 ntBASIC21.59■■□□□ 1.05
HttP42859 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HttP42859 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HttP42859 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.59■■□□□ 1.05
HttP42859 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
HttP42859 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.59■■□□□ 1.05
HttP42859 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HttP42859 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HttP42859 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HttP42859 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
HttP42859 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HttP42859 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
HttP42859 AC121577.1-201ENSMUST00000227302 707 ntBASIC21.58■■□□□ 1.04
HttP42859 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.58■■□□□ 1.04
HttP42859 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HttP42859 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.57■■□□□ 1.04
HttP42859 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HttP42859 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HttP42859 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HttP42859 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
HttP42859 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HttP42859 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HttP42859 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HttP42859 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.57■■□□□ 1.04
HttP42859 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HttP42859 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
HttP42859 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HttP42859 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
HttP42859 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HttP42859 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HttP42859 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
HttP42859 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HttP42859 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HttP42859 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HttP42859 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HttP42859 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HttP42859 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
HttP42859 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HttP42859 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
HttP42859 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HttP42859 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HttP42859 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HttP42859 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC21.55■■□□□ 1.04
HttP42859 Gm11643-201ENSMUST00000119578 864 ntBASIC21.55■■□□□ 1.04
HttP42859 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HttP42859 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HttP42859 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.54■■□□□ 1.04
HttP42859 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
HttP42859 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
HttP42859 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.54■■□□□ 1.04
HttP42859 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
HttP42859 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HttP42859 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HttP42859 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
HttP42859 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
HttP42859 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HttP42859 Gm13534-201ENSMUST00000121169 513 ntBASIC21.53■■□□□ 1.04
HttP42859 Gm6576-201ENSMUST00000169678 883 ntBASIC21.53■■□□□ 1.04
HttP42859 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.53■■□□□ 1.04
HttP42859 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HttP42859 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
HttP42859 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
HttP42859 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HttP42859 Gm5643-201ENSMUST00000117081 966 ntBASIC21.53■■□□□ 1.04
HttP42859 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HttP42859 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HttP42859 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.51■■□□□ 1.03
HttP42859 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.51■■□□□ 1.03
HttP42859 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HttP42859 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
HttP42859 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HttP42859 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HttP42859 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HttP42859 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.5■■□□□ 1.03
HttP42859 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
HttP42859 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.5■■□□□ 1.03
HttP42859 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HttP42859 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.5■■□□□ 1.03
HttP42859 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.5■■□□□ 1.03
HttP42859 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC21.5■■□□□ 1.03
HttP42859 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HttP42859 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HttP42859 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HttP42859 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
HttP42859 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HttP42859 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HttP42859 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
HttP42859 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HttP42859 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.49■■□□□ 1.03
HttP42859 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HttP42859 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HttP42859 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
HttP42859 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.48■■□□□ 1.03
HttP42859 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HttP42859 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HttP42859 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.48■■□□□ 1.03
HttP42859 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms