Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-2P42586 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Nkx2-2P42586 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.15■□□□□ 0.5
Nkx2-2P42586 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-2P42586 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-2P42586 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-2P42586 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-2P42586 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-2P42586 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-2P42586 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-2P42586 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.14■□□□□ 0.49
Nkx2-2P42586 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-2P42586 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Nkx2-2P42586 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Nkx2-2P42586 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-2P42586 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-2P42586 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-2P42586 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Nkx2-2P42586 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-2P42586 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-2P42586 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Nkx2-2P42586 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-2P42586 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-2P42586 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-2P42586 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-2P42586 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-2P42586 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Nkx2-2P42586 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.13■□□□□ 0.49
Nkx2-2P42586 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.13■□□□□ 0.49
Nkx2-2P42586 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-2P42586 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-2P42586 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-2P42586 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-2P42586 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-2P42586 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.12■□□□□ 0.49
Nkx2-2P42586 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.12■□□□□ 0.49
Nkx2-2P42586 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-2P42586 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-2P42586 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-2P42586 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-2P42586 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-2P42586 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.12■□□□□ 0.49
Nkx2-2P42586 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-2P42586 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx2-2P42586 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx2-2P42586 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Nkx2-2P42586 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.11■□□□□ 0.49
Nkx2-2P42586 Spcs1-204ENSMUST00000226782 949 ntBASIC18.11■□□□□ 0.49
Nkx2-2P42586 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx2-2P42586 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx2-2P42586 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx2-2P42586 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx2-2P42586 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx2-2P42586 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.11■□□□□ 0.49
Nkx2-2P42586 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-2P42586 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-2P42586 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-2P42586 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-2P42586 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-2P42586 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-2P42586 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Nkx2-2P42586 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.1■□□□□ 0.49
Nkx2-2P42586 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-2P42586 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.1■□□□□ 0.49
Nkx2-2P42586 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Nkx2-2P42586 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Nkx2-2P42586 Notumos-201ENSMUST00000151998 2659 ntBASIC18.1■□□□□ 0.49
Nkx2-2P42586 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-2P42586 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx2-2P42586 AA386476-201ENSMUST00000098781 1665 ntBASIC18.09■□□□□ 0.49
Nkx2-2P42586 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx2-2P42586 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Nkx2-2P42586 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Nkx2-2P42586 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx2-2P42586 Gm12821-201ENSMUST00000120022 600 ntBASIC18.09■□□□□ 0.49
Nkx2-2P42586 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx2-2P42586 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx2-2P42586 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Nkx2-2P42586 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Nkx2-2P42586 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx2-2P42586 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.09■□□□□ 0.49
Nkx2-2P42586 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
Nkx2-2P42586 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nkx2-2P42586 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.08■□□□□ 0.49
Nkx2-2P42586 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nkx2-2P42586 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nkx2-2P42586 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nkx2-2P42586 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.08■□□□□ 0.48
Nkx2-2P42586 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nkx2-2P42586 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nkx2-2P42586 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Nkx2-2P42586 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.08■□□□□ 0.48
Nkx2-2P42586 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Nkx2-2P42586 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Nkx2-2P42586 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-2P42586 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-2P42586 Gm12251-201ENSMUST00000117893 792 ntBASIC18.07■□□□□ 0.48
Nkx2-2P42586 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.07■□□□□ 0.48
Nkx2-2P42586 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-2P42586 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms