Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfsf9P41274 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfsf9P41274 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfsf9P41274 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Tnfsf9P41274 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Tnfsf9P41274 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Tnfsf9P41274 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfsf9P41274 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfsf9P41274 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfsf9P41274 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Tnfsf9P41274 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfsf9P41274 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfsf9P41274 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfsf9P41274 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfsf9P41274 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.86■□□□□ 0.61
Tnfsf9P41274 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfsf9P41274 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfsf9P41274 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.86■□□□□ 0.61
Tnfsf9P41274 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.86■□□□□ 0.61
Tnfsf9P41274 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.86■□□□□ 0.61
Tnfsf9P41274 Gm10493-201ENSMUST00000097270 612 ntBASIC18.86■□□□□ 0.61
Tnfsf9P41274 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfsf9P41274 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Tnfsf9P41274 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfsf9P41274 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfsf9P41274 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfsf9P41274 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.85■□□□□ 0.61
Tnfsf9P41274 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfsf9P41274 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfsf9P41274 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfsf9P41274 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Tnfsf9P41274 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfsf9P41274 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfsf9P41274 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Tnfsf9P41274 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfsf9P41274 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfsf9P41274 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfsf9P41274 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfsf9P41274 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Tnfsf9P41274 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfsf9P41274 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfsf9P41274 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfsf9P41274 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfsf9P41274 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfsf9P41274 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Tnfsf9P41274 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfsf9P41274 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfsf9P41274 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfsf9P41274 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfsf9P41274 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Tnfsf9P41274 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfsf9P41274 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tnfsf9P41274 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tnfsf9P41274 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tnfsf9P41274 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tnfsf9P41274 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tnfsf9P41274 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tnfsf9P41274 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Tnfsf9P41274 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Tnfsf9P41274 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.83■□□□□ 0.61
Tnfsf9P41274 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tnfsf9P41274 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfsf9P41274 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Tnfsf9P41274 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.83■□□□□ 0.6
Tnfsf9P41274 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfsf9P41274 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfsf9P41274 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfsf9P41274 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfsf9P41274 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfsf9P41274 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfsf9P41274 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Tnfsf9P41274 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfsf9P41274 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfsf9P41274 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfsf9P41274 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.82■□□□□ 0.6
Tnfsf9P41274 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfsf9P41274 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.82■□□□□ 0.6
Tnfsf9P41274 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.82■□□□□ 0.6
Tnfsf9P41274 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.82■□□□□ 0.6
Tnfsf9P41274 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.82■□□□□ 0.6
Tnfsf9P41274 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfsf9P41274 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Tnfsf9P41274 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfsf9P41274 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfsf9P41274 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfsf9P41274 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfsf9P41274 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfsf9P41274 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfsf9P41274 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfsf9P41274 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfsf9P41274 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfsf9P41274 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfsf9P41274 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfsf9P41274 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfsf9P41274 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.8■□□□□ 0.6
Tnfsf9P41274 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.8■□□□□ 0.6
Tnfsf9P41274 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.8■□□□□ 0.6
Tnfsf9P41274 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfsf9P41274 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfsf9P41274 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms