Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.55■□□□□ 0.88
Cxcl12P40224 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cxcl12P40224 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cxcl12P40224 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cxcl12P40224 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cxcl12P40224 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cxcl12P40224 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cxcl12P40224 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cxcl12P40224 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.54■□□□□ 0.88
Cxcl12P40224 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.54■□□□□ 0.88
Cxcl12P40224 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cxcl12P40224 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.53■□□□□ 0.88
Cxcl12P40224 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cxcl12P40224 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cxcl12P40224 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cxcl12P40224 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cxcl12P40224 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.52■□□□□ 0.88
Cxcl12P40224 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.52■□□□□ 0.88
Cxcl12P40224 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.52■□□□□ 0.88
Cxcl12P40224 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cxcl12P40224 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cxcl12P40224 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cxcl12P40224 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.52■□□□□ 0.88
Cxcl12P40224 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cxcl12P40224 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cxcl12P40224 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cxcl12P40224 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cxcl12P40224 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cxcl12P40224 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cxcl12P40224 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cxcl12P40224 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cxcl12P40224 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.51■□□□□ 0.87
Cxcl12P40224 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cxcl12P40224 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Cxcl12P40224 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cxcl12P40224 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.5■□□□□ 0.87
Cxcl12P40224 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.5■□□□□ 0.87
Cxcl12P40224 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.5■□□□□ 0.87
Cxcl12P40224 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.5■□□□□ 0.87
Cxcl12P40224 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cxcl12P40224 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cxcl12P40224 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cxcl12P40224 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cxcl12P40224 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cxcl12P40224 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cxcl12P40224 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cxcl12P40224 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cxcl12P40224 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cxcl12P40224 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cxcl12P40224 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.49■□□□□ 0.87
Cxcl12P40224 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cxcl12P40224 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cxcl12P40224 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Cxcl12P40224 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cxcl12P40224 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cxcl12P40224 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cxcl12P40224 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.48■□□□□ 0.87
Cxcl12P40224 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.48■□□□□ 0.87
Cxcl12P40224 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cxcl12P40224 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Cxcl12P40224 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.47■□□□□ 0.87
Cxcl12P40224 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cxcl12P40224 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cxcl12P40224 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cxcl12P40224 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Cxcl12P40224 Gm38205-201ENSMUST00000192243 258 ntBASIC20.47■□□□□ 0.87
Cxcl12P40224 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cxcl12P40224 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.46■□□□□ 0.87
Cxcl12P40224 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.46■□□□□ 0.87
Cxcl12P40224 Gm13836-201ENSMUST00000121159 501 ntBASIC20.46■□□□□ 0.87
Cxcl12P40224 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.46■□□□□ 0.87
Cxcl12P40224 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cxcl12P40224 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.45■□□□□ 0.86
Cxcl12P40224 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cxcl12P40224 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cxcl12P40224 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cxcl12P40224 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cxcl12P40224 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Cxcl12P40224 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cxcl12P40224 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
Cxcl12P40224 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cxcl12P40224 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cxcl12P40224 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cxcl12P40224 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.44■□□□□ 0.86
Cxcl12P40224 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cxcl12P40224 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.44■□□□□ 0.86
Cxcl12P40224 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cxcl12P40224 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.44■□□□□ 0.86
Cxcl12P40224 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cxcl12P40224 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cxcl12P40224 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cxcl12P40224 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Cxcl12P40224 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cxcl12P40224 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cxcl12P40224 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.43■□□□□ 0.86
Cxcl12P40224 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cxcl12P40224 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.43■□□□□ 0.86
Cxcl12P40224 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cxcl12P40224 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cxcl12P40224 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms