Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
HmgclP38060 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HmgclP38060 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HmgclP38060 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HmgclP38060 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HmgclP38060 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.49■□□□□ 0.71
HmgclP38060 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HmgclP38060 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HmgclP38060 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HmgclP38060 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.48■□□□□ 0.71
HmgclP38060 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HmgclP38060 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HmgclP38060 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HmgclP38060 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
HmgclP38060 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HmgclP38060 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HmgclP38060 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
HmgclP38060 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HmgclP38060 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HmgclP38060 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HmgclP38060 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
HmgclP38060 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.47■□□□□ 0.71
HmgclP38060 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.47■□□□□ 0.71
HmgclP38060 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HmgclP38060 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HmgclP38060 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HmgclP38060 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.46■□□□□ 0.71
HmgclP38060 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HmgclP38060 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
HmgclP38060 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HmgclP38060 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HmgclP38060 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HmgclP38060 Gm12821-201ENSMUST00000120022 600 ntBASIC19.46■□□□□ 0.71
HmgclP38060 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.46■□□□□ 0.71
HmgclP38060 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HmgclP38060 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HmgclP38060 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HmgclP38060 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HmgclP38060 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.45■□□□□ 0.7
HmgclP38060 Spcs1-204ENSMUST00000226782 949 ntBASIC19.45■□□□□ 0.7
HmgclP38060 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
HmgclP38060 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
HmgclP38060 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HmgclP38060 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HmgclP38060 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HmgclP38060 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HmgclP38060 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HmgclP38060 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HmgclP38060 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HmgclP38060 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.44■□□□□ 0.7
HmgclP38060 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
HmgclP38060 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HmgclP38060 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.44■□□□□ 0.7
HmgclP38060 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HmgclP38060 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.44■□□□□ 0.7
HmgclP38060 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HmgclP38060 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HmgclP38060 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HmgclP38060 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HmgclP38060 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HmgclP38060 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HmgclP38060 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
HmgclP38060 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HmgclP38060 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HmgclP38060 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HmgclP38060 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.43■□□□□ 0.7
HmgclP38060 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.43■□□□□ 0.7
HmgclP38060 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.43■□□□□ 0.7
HmgclP38060 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HmgclP38060 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HmgclP38060 AA386476-201ENSMUST00000098781 1665 ntBASIC19.43■□□□□ 0.7
HmgclP38060 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.43■□□□□ 0.7
HmgclP38060 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HmgclP38060 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.42■□□□□ 0.7
HmgclP38060 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HmgclP38060 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HmgclP38060 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
HmgclP38060 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HmgclP38060 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HmgclP38060 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HmgclP38060 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
HmgclP38060 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HmgclP38060 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HmgclP38060 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HmgclP38060 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HmgclP38060 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HmgclP38060 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HmgclP38060 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HmgclP38060 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HmgclP38060 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HmgclP38060 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HmgclP38060 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HmgclP38060 Gm12251-201ENSMUST00000117893 792 ntBASIC19.4■□□□□ 0.7
HmgclP38060 Gm27454-201ENSMUST00000185090 204 ntBASIC19.4■□□□□ 0.7
HmgclP38060 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.4■□□□□ 0.7
HmgclP38060 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
HmgclP38060 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
HmgclP38060 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HmgclP38060 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HmgclP38060 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms