Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.71■□□□□ 0.91
Rfc1P35601 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfc1P35601 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfc1P35601 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfc1P35601 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfc1P35601 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfc1P35601 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfc1P35601 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rfc1P35601 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfc1P35601 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfc1P35601 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.71■□□□□ 0.91
Rfc1P35601 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Rfc1P35601 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.7■□□□□ 0.9
Rfc1P35601 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfc1P35601 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfc1P35601 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfc1P35601 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.7■□□□□ 0.9
Rfc1P35601 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfc1P35601 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfc1P35601 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
Rfc1P35601 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
Rfc1P35601 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfc1P35601 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfc1P35601 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfc1P35601 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.69■□□□□ 0.9
Rfc1P35601 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfc1P35601 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfc1P35601 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Rfc1P35601 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Rfc1P35601 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rfc1P35601 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.69■□□□□ 0.9
Rfc1P35601 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfc1P35601 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfc1P35601 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfc1P35601 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfc1P35601 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Rfc1P35601 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfc1P35601 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfc1P35601 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfc1P35601 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfc1P35601 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfc1P35601 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfc1P35601 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.68■□□□□ 0.9
Rfc1P35601 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfc1P35601 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.68■□□□□ 0.9
Rfc1P35601 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfc1P35601 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.67■□□□□ 0.9
Rfc1P35601 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfc1P35601 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfc1P35601 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.67■□□□□ 0.9
Rfc1P35601 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfc1P35601 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.66■□□□□ 0.9
Rfc1P35601 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfc1P35601 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfc1P35601 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rfc1P35601 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.66■□□□□ 0.9
Rfc1P35601 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rfc1P35601 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rfc1P35601 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfc1P35601 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfc1P35601 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rfc1P35601 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfc1P35601 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfc1P35601 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfc1P35601 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Rfc1P35601 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfc1P35601 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.65■□□□□ 0.9
Rfc1P35601 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.65■□□□□ 0.9
Rfc1P35601 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rfc1P35601 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfc1P35601 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.65■□□□□ 0.9
Rfc1P35601 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.65■□□□□ 0.9
Rfc1P35601 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rfc1P35601 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.64■□□□□ 0.9
Rfc1P35601 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rfc1P35601 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rfc1P35601 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rfc1P35601 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rfc1P35601 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfc1P35601 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Rfc1P35601 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Rfc1P35601 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.64■□□□□ 0.89
Rfc1P35601 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.64■□□□□ 0.89
Rfc1P35601 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rfc1P35601 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rfc1P35601 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfc1P35601 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfc1P35601 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfc1P35601 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rfc1P35601 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfc1P35601 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Rfc1P35601 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Rfc1P35601 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfc1P35601 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rfc1P35601 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rfc1P35601 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfc1P35601 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
Rfc1P35601 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfc1P35601 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfc1P35601 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms