Protein–RNA interactions for Protein: P32972

Tnfsf8, Tumor necrosis factor ligand superfamily member 8, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf8P32972 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfsf8P32972 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfsf8P32972 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfsf8P32972 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Tnfsf8P32972 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfsf8P32972 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfsf8P32972 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.26■□□□□ 0.19
Tnfsf8P32972 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfsf8P32972 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfsf8P32972 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfsf8P32972 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfsf8P32972 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.26■□□□□ 0.19
Tnfsf8P32972 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfsf8P32972 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
Tnfsf8P32972 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfsf8P32972 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfsf8P32972 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfsf8P32972 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfsf8P32972 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.25■□□□□ 0.19
Tnfsf8P32972 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Tnfsf8P32972 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfsf8P32972 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.25■□□□□ 0.19
Tnfsf8P32972 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfsf8P32972 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfsf8P32972 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfsf8P32972 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfsf8P32972 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfsf8P32972 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfsf8P32972 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfsf8P32972 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tnfsf8P32972 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Tnfsf8P32972 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Tnfsf8P32972 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tnfsf8P32972 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Tnfsf8P32972 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tnfsf8P32972 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tnfsf8P32972 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Tnfsf8P32972 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfsf8P32972 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfsf8P32972 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfsf8P32972 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Tnfsf8P32972 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfsf8P32972 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
Tnfsf8P32972 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.23■□□□□ 0.19
Tnfsf8P32972 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.23■□□□□ 0.19
Tnfsf8P32972 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.23■□□□□ 0.19
Tnfsf8P32972 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Tnfsf8P32972 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfsf8P32972 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.23■□□□□ 0.19
Tnfsf8P32972 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Tnfsf8P32972 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfsf8P32972 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfsf8P32972 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfsf8P32972 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.22■□□□□ 0.19
Tnfsf8P32972 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.22■□□□□ 0.19
Tnfsf8P32972 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.22■□□□□ 0.19
Tnfsf8P32972 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfsf8P32972 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfsf8P32972 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfsf8P32972 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Tnfsf8P32972 Gm7143-201ENSMUST00000222811 859 ntBASIC16.22■□□□□ 0.19
Tnfsf8P32972 Gm40881-201ENSMUST00000223397 166 ntBASIC16.22■□□□□ 0.19
Tnfsf8P32972 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfsf8P32972 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfsf8P32972 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.22■□□□□ 0.19
Tnfsf8P32972 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfsf8P32972 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.22■□□□□ 0.19
Tnfsf8P32972 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfsf8P32972 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.22■□□□□ 0.19
Tnfsf8P32972 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Tnfsf8P32972 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.22■□□□□ 0.19
Tnfsf8P32972 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfsf8P32972 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfsf8P32972 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfsf8P32972 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.21■□□□□ 0.19
Tnfsf8P32972 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfsf8P32972 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfsf8P32972 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.21■□□□□ 0.19
Tnfsf8P32972 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfsf8P32972 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Tnfsf8P32972 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Tnfsf8P32972 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Tnfsf8P32972 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Tnfsf8P32972 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfsf8P32972 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfsf8P32972 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfsf8P32972 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Tnfsf8P32972 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Tnfsf8P32972 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfsf8P32972 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfsf8P32972 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfsf8P32972 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.2■□□□□ 0.18
Tnfsf8P32972 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Tnfsf8P32972 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfsf8P32972 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.2■□□□□ 0.18
Tnfsf8P32972 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Tnfsf8P32972 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfsf8P32972 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
Tnfsf8P32972 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfsf8P32972 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms