Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.11■□□□□ 0.81
Rc3h2P0C090 Gm42778-201ENSMUST00000199644 553 ntBASIC20.11■□□□□ 0.81
Rc3h2P0C090 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rc3h2P0C090 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.11■□□□□ 0.81
Rc3h2P0C090 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rc3h2P0C090 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Rc3h2P0C090 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rc3h2P0C090 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rc3h2P0C090 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rc3h2P0C090 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rc3h2P0C090 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.1■□□□□ 0.81
Rc3h2P0C090 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rc3h2P0C090 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Rc3h2P0C090 Gm18671-201ENSMUST00000214826 683 ntBASIC20.1■□□□□ 0.81
Rc3h2P0C090 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Rc3h2P0C090 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.1■□□□□ 0.81
Rc3h2P0C090 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rc3h2P0C090 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rc3h2P0C090 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rc3h2P0C090 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rc3h2P0C090 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Rc3h2P0C090 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Rc3h2P0C090 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rc3h2P0C090 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Rc3h2P0C090 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rc3h2P0C090 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rc3h2P0C090 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rc3h2P0C090 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rc3h2P0C090 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rc3h2P0C090 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rc3h2P0C090 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Rc3h2P0C090 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rc3h2P0C090 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.08■□□□□ 0.81
Rc3h2P0C090 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.08■□□□□ 0.81
Rc3h2P0C090 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.08■□□□□ 0.81
Rc3h2P0C090 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rc3h2P0C090 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rc3h2P0C090 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
Rc3h2P0C090 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.08■□□□□ 0.8
Rc3h2P0C090 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Rc3h2P0C090 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rc3h2P0C090 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rc3h2P0C090 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rc3h2P0C090 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rc3h2P0C090 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rc3h2P0C090 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.07■□□□□ 0.8
Rc3h2P0C090 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.07■□□□□ 0.8
Rc3h2P0C090 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.07■□□□□ 0.8
Rc3h2P0C090 Gm29257-201ENSMUST00000186115 639 ntBASIC20.07■□□□□ 0.8
Rc3h2P0C090 AV356131-201ENSMUST00000206201 750 ntBASIC20.07■□□□□ 0.8
Rc3h2P0C090 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.07■□□□□ 0.8
Rc3h2P0C090 Gm9988-201ENSMUST00000069786 435 ntBASIC20.07■□□□□ 0.8
Rc3h2P0C090 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rc3h2P0C090 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.07■□□□□ 0.8
Rc3h2P0C090 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rc3h2P0C090 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Rc3h2P0C090 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Rc3h2P0C090 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rc3h2P0C090 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
Rc3h2P0C090 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rc3h2P0C090 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rc3h2P0C090 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.06■□□□□ 0.8
Rc3h2P0C090 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rc3h2P0C090 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rc3h2P0C090 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rc3h2P0C090 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Rc3h2P0C090 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rc3h2P0C090 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Rc3h2P0C090 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rc3h2P0C090 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rc3h2P0C090 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rc3h2P0C090 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rc3h2P0C090 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rc3h2P0C090 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Rc3h2P0C090 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rc3h2P0C090 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rc3h2P0C090 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rc3h2P0C090 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rc3h2P0C090 Gm27801-201ENSMUST00000184174 223 ntBASIC20.04■□□□□ 0.8
Rc3h2P0C090 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.04■□□□□ 0.8
Rc3h2P0C090 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.04■□□□□ 0.8
Rc3h2P0C090 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rc3h2P0C090 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rc3h2P0C090 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rc3h2P0C090 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rc3h2P0C090 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.03■□□□□ 0.8
Rc3h2P0C090 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rc3h2P0C090 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rc3h2P0C090 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.03■□□□□ 0.8
Rc3h2P0C090 Gm37179-201ENSMUST00000194862 823 ntBASIC20.03■□□□□ 0.8
Rc3h2P0C090 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rc3h2P0C090 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rc3h2P0C090 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rc3h2P0C090 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rc3h2P0C090 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Rc3h2P0C090 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rc3h2P0C090 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rc3h2P0C090 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rc3h2P0C090 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rc3h2P0C090 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 551.8 ms