Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
P06344 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
P06344 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
P06344 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
P06344 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
P06344 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
P06344 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
P06344 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.59■□□□□ 0.41
P06344 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
P06344 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
P06344 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P06344 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
P06344 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
P06344 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
P06344 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
P06344 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
P06344 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
P06344 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
P06344 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
P06344 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.58■□□□□ 0.41
P06344 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
P06344 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
P06344 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
P06344 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
P06344 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.58■□□□□ 0.4
P06344 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
P06344 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
P06344 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P06344 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
P06344 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
P06344 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.57■□□□□ 0.4
P06344 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P06344 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
P06344 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.57■□□□□ 0.4
P06344 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
P06344 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
P06344 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P06344 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P06344 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
P06344 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P06344 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
P06344 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.56■□□□□ 0.4
P06344 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P06344 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P06344 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
P06344 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
P06344 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
P06344 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
P06344 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
P06344 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
P06344 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
P06344 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P06344 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P06344 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
P06344 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
P06344 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
P06344 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P06344 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P06344 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
P06344 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
P06344 Gm26833-201ENSMUST00000180899 440 ntBASIC17.55■□□□□ 0.4
P06344 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P06344 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P06344 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P06344 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
P06344 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
P06344 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P06344 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
P06344 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.54■□□□□ 0.4
P06344 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
P06344 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
P06344 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
P06344 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P06344 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
P06344 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P06344 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P06344 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
P06344 Golph3-202ENSMUST00000226517 2359 ntBASIC17.53■□□□□ 0.4
P06344 Iqck-206ENSMUST00000208658 2891 ntBASIC17.53■□□□□ 0.4
P06344 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.53■□□□□ 0.4
P06344 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
P06344 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
P06344 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P06344 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P06344 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.53■□□□□ 0.4
P06344 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
P06344 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P06344 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P06344 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P06344 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
P06344 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.52■□□□□ 0.4
P06344 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
P06344 Smad6-203ENSMUST00000179458 273 ntBASIC17.52■□□□□ 0.4
P06344 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.52■□□□□ 0.4
P06344 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P06344 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
P06344 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.52■□□□□ 0.4
P06344 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P06344 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
P06344 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms