Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
P04213 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
P04213 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
P04213 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
P04213 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
P04213 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.96■□□□□ 0.63
P04213 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.96■□□□□ 0.63
P04213 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
P04213 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
P04213 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P04213 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
P04213 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
P04213 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P04213 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P04213 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.95■□□□□ 0.62
P04213 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
P04213 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
P04213 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P04213 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
P04213 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P04213 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
P04213 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.95■□□□□ 0.62
P04213 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
P04213 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
P04213 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
P04213 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
P04213 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
P04213 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.94■□□□□ 0.62
P04213 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
P04213 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
P04213 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.94■□□□□ 0.62
P04213 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.94■□□□□ 0.62
P04213 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.94■□□□□ 0.62
P04213 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
P04213 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
P04213 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
P04213 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P04213 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P04213 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.93■□□□□ 0.62
P04213 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.93■□□□□ 0.62
P04213 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
P04213 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
P04213 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P04213 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.93■□□□□ 0.62
P04213 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
P04213 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P04213 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
P04213 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
P04213 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
P04213 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.92■□□□□ 0.62
P04213 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
P04213 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
P04213 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.92■□□□□ 0.62
P04213 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
P04213 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
P04213 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.92■□□□□ 0.62
P04213 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
P04213 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
P04213 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
P04213 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
P04213 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
P04213 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
P04213 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
P04213 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
P04213 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
P04213 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P04213 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
P04213 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P04213 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
P04213 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P04213 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
P04213 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P04213 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.9■□□□□ 0.62
P04213 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
P04213 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P04213 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P04213 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
P04213 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
P04213 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
P04213 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
P04213 Golgb1-201ENSMUST00000023534 498 ntBASIC18.89■□□□□ 0.61
P04213 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
P04213 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
P04213 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
P04213 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
P04213 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
P04213 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
P04213 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P04213 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.88■□□□□ 0.61
P04213 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P04213 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
P04213 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.88■□□□□ 0.61
P04213 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
P04213 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P04213 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P04213 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P04213 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P04213 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
P04213 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
P04213 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms