Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.65■□□□□ 0.58
Krt1P04104 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt1P04104 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt1P04104 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt1P04104 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt1P04104 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt1P04104 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt1P04104 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Krt1P04104 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt1P04104 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt1P04104 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.65■□□□□ 0.58
Krt1P04104 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt1P04104 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Krt1P04104 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt1P04104 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt1P04104 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.65■□□□□ 0.58
Krt1P04104 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt1P04104 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Krt1P04104 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt1P04104 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Krt1P04104 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Krt1P04104 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt1P04104 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt1P04104 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Krt1P04104 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt1P04104 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Krt1P04104 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt1P04104 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Krt1P04104 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Krt1P04104 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt1P04104 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Krt1P04104 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt1P04104 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Krt1P04104 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt1P04104 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt1P04104 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt1P04104 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Krt1P04104 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt1P04104 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Krt1P04104 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt1P04104 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Krt1P04104 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.62■□□□□ 0.57
Krt1P04104 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Krt1P04104 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Krt1P04104 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt1P04104 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt1P04104 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt1P04104 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt1P04104 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt1P04104 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Krt1P04104 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt1P04104 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt1P04104 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Krt1P04104 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt1P04104 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt1P04104 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Krt1P04104 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt1P04104 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt1P04104 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Krt1P04104 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Krt1P04104 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt1P04104 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Krt1P04104 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Krt1P04104 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt1P04104 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt1P04104 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Krt1P04104 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt1P04104 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Krt1P04104 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Krt1P04104 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.6■□□□□ 0.57
Krt1P04104 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt1P04104 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Krt1P04104 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.59■□□□□ 0.57
Krt1P04104 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt1P04104 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt1P04104 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Krt1P04104 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Krt1P04104 Gm6311-201ENSMUST00000073790 878 ntBASIC18.59■□□□□ 0.57
Krt1P04104 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt1P04104 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt1P04104 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt1P04104 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Krt1P04104 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.58■□□□□ 0.57
Krt1P04104 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.58■□□□□ 0.57
Krt1P04104 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Krt1P04104 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Krt1P04104 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Krt1P04104 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Krt1P04104 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Krt1P04104 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.58■□□□□ 0.56
Krt1P04104 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Krt1P04104 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Krt1P04104 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Krt1P04104 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Krt1P04104 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Krt1P04104 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.58■□□□□ 0.56
Krt1P04104 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Krt1P04104 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Krt1P04104 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Krt1P04104 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms