Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.13■□□□□ 0.33
Igh-VJ558P01758 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.13■□□□□ 0.33
Igh-VJ558P01758 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igh-VJ558P01758 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igh-VJ558P01758 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Igh-VJ558P01758 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.12■□□□□ 0.33
Igh-VJ558P01758 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igh-VJ558P01758 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igh-VJ558P01758 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igh-VJ558P01758 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Igh-VJ558P01758 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igh-VJ558P01758 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igh-VJ558P01758 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Igh-VJ558P01758 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Igh-VJ558P01758 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Igh-VJ558P01758 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Igh-VJ558P01758 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igh-VJ558P01758 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Igh-VJ558P01758 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igh-VJ558P01758 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igh-VJ558P01758 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igh-VJ558P01758 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igh-VJ558P01758 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Igh-VJ558P01758 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Igh-VJ558P01758 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Igh-VJ558P01758 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Igh-VJ558P01758 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Igh-VJ558P01758 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Igh-VJ558P01758 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Igh-VJ558P01758 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.1■□□□□ 0.33
Igh-VJ558P01758 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Igh-VJ558P01758 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Igh-VJ558P01758 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.1■□□□□ 0.33
Igh-VJ558P01758 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Igh-VJ558P01758 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.1■□□□□ 0.33
Igh-VJ558P01758 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Igh-VJ558P01758 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
Igh-VJ558P01758 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Igh-VJ558P01758 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Igh-VJ558P01758 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Igh-VJ558P01758 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Igh-VJ558P01758 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Igh-VJ558P01758 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Igh-VJ558P01758 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Igh-VJ558P01758 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Igh-VJ558P01758 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Igh-VJ558P01758 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Igh-VJ558P01758 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Igh-VJ558P01758 Gm9847-201ENSMUST00000052528 599 ntBASIC17.09■□□□□ 0.33
Igh-VJ558P01758 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.09■□□□□ 0.33
Igh-VJ558P01758 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Igh-VJ558P01758 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Igh-VJ558P01758 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Igh-VJ558P01758 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Igh-VJ558P01758 AA386476-201ENSMUST00000098781 1665 ntBASIC17.08■□□□□ 0.32
Igh-VJ558P01758 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Igh-VJ558P01758 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Igh-VJ558P01758 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.08■□□□□ 0.32
Igh-VJ558P01758 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.08■□□□□ 0.32
Igh-VJ558P01758 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Igh-VJ558P01758 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Igh-VJ558P01758 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Igh-VJ558P01758 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.07■□□□□ 0.32
Igh-VJ558P01758 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Igh-VJ558P01758 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.07■□□□□ 0.32
Igh-VJ558P01758 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Igh-VJ558P01758 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Igh-VJ558P01758 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Igh-VJ558P01758 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Igh-VJ558P01758 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Igh-VJ558P01758 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Igh-VJ558P01758 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.06■□□□□ 0.32
Igh-VJ558P01758 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Igh-VJ558P01758 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Igh-VJ558P01758 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Igh-VJ558P01758 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Igh-VJ558P01758 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Igh-VJ558P01758 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.06■□□□□ 0.32
Igh-VJ558P01758 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Igh-VJ558P01758 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Igh-VJ558P01758 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Igh-VJ558P01758 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.06■□□□□ 0.32
Igh-VJ558P01758 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Igh-VJ558P01758 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Igh-VJ558P01758 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Igh-VJ558P01758 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Igh-VJ558P01758 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.05■□□□□ 0.32
Igh-VJ558P01758 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Igh-VJ558P01758 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Igh-VJ558P01758 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Igh-VJ558P01758 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Igh-VJ558P01758 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Igh-VJ558P01758 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Igh-VJ558P01758 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Igh-VJ558P01758 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Igh-VJ558P01758 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Igh-VJ558P01758 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Igh-VJ558P01758 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Igh-VJ558P01758 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Igh-VJ558P01758 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms