Protein–RNA interactions for Protein: P01575

Ifnb1, Interferon beta, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifnb1P01575 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Ifnb1P01575 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.85■□□□□ 0.93
Ifnb1P01575 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ifnb1P01575 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ifnb1P01575 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ifnb1P01575 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.84■□□□□ 0.93
Ifnb1P01575 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
Ifnb1P01575 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ifnb1P01575 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ifnb1P01575 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ifnb1P01575 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Ifnb1P01575 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.84■□□□□ 0.93
Ifnb1P01575 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ifnb1P01575 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ifnb1P01575 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ifnb1P01575 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ifnb1P01575 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ifnb1P01575 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.83■□□□□ 0.93
Ifnb1P01575 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ifnb1P01575 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.83■□□□□ 0.93
Ifnb1P01575 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ifnb1P01575 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Ifnb1P01575 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ifnb1P01575 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ifnb1P01575 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ifnb1P01575 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.82■□□□□ 0.92
Ifnb1P01575 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.82■□□□□ 0.92
Ifnb1P01575 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ifnb1P01575 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ifnb1P01575 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ifnb1P01575 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
Ifnb1P01575 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Ifnb1P01575 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ifnb1P01575 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ifnb1P01575 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ifnb1P01575 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Ifnb1P01575 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ifnb1P01575 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.81■□□□□ 0.92
Ifnb1P01575 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.81■□□□□ 0.92
Ifnb1P01575 Golgb1-201ENSMUST00000023534 498 ntBASIC20.81■□□□□ 0.92
Ifnb1P01575 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ifnb1P01575 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ifnb1P01575 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.81■□□□□ 0.92
Ifnb1P01575 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ifnb1P01575 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ifnb1P01575 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Ifnb1P01575 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ifnb1P01575 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Ifnb1P01575 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Ifnb1P01575 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ifnb1P01575 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ifnb1P01575 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ifnb1P01575 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ifnb1P01575 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.8■□□□□ 0.92
Ifnb1P01575 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ifnb1P01575 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ifnb1P01575 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ifnb1P01575 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ifnb1P01575 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Ifnb1P01575 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ifnb1P01575 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ifnb1P01575 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Ifnb1P01575 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ifnb1P01575 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ifnb1P01575 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Ifnb1P01575 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ifnb1P01575 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ifnb1P01575 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.78■□□□□ 0.92
Ifnb1P01575 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ifnb1P01575 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ifnb1P01575 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Ifnb1P01575 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Ifnb1P01575 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ifnb1P01575 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.77■□□□□ 0.92
Ifnb1P01575 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ifnb1P01575 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.77■□□□□ 0.92
Ifnb1P01575 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ifnb1P01575 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ifnb1P01575 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ifnb1P01575 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.76■□□□□ 0.91
Ifnb1P01575 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Ifnb1P01575 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ifnb1P01575 Gm12922-201ENSMUST00000120626 809 ntBASIC20.76■□□□□ 0.91
Ifnb1P01575 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ifnb1P01575 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ifnb1P01575 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ifnb1P01575 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.76■□□□□ 0.91
Ifnb1P01575 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ifnb1P01575 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ifnb1P01575 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ifnb1P01575 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Ifnb1P01575 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.75■□□□□ 0.91
Ifnb1P01575 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ifnb1P01575 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.75■□□□□ 0.91
Ifnb1P01575 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ifnb1P01575 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ifnb1P01575 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Ifnb1P01575 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ifnb1P01575 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Ifnb1P01575 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms