Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
Vti1aO89116 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Vti1aO89116 Smad6-203ENSMUST00000179458 273 ntBASIC21.26■□□□□ 0.99
Vti1aO89116 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.26■□□□□ 0.99
Vti1aO89116 Gm26571-201ENSMUST00000181399 666 ntBASIC21.26■□□□□ 0.99
Vti1aO89116 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Vti1aO89116 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vti1aO89116 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vti1aO89116 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Vti1aO89116 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vti1aO89116 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.26■□□□□ 0.99
Vti1aO89116 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vti1aO89116 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Vti1aO89116 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vti1aO89116 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Vti1aO89116 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Vti1aO89116 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.25■□□□□ 0.99
Vti1aO89116 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.25■□□□□ 0.99
Vti1aO89116 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vti1aO89116 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vti1aO89116 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Vti1aO89116 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.25■□□□□ 0.99
Vti1aO89116 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Vti1aO89116 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vti1aO89116 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.24■□□□□ 0.99
Vti1aO89116 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vti1aO89116 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Vti1aO89116 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vti1aO89116 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.24■□□□□ 0.99
Vti1aO89116 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vti1aO89116 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.24■□□□□ 0.99
Vti1aO89116 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Vti1aO89116 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Vti1aO89116 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vti1aO89116 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vti1aO89116 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vti1aO89116 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vti1aO89116 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Vti1aO89116 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vti1aO89116 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Vti1aO89116 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vti1aO89116 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Vti1aO89116 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Vti1aO89116 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Vti1aO89116 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vti1aO89116 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Vti1aO89116 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.23■□□□□ 0.99
Vti1aO89116 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vti1aO89116 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.23■□□□□ 0.99
Vti1aO89116 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vti1aO89116 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vti1aO89116 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vti1aO89116 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Vti1aO89116 Gm27405-201ENSMUST00000184201 112 ntBASIC21.22■□□□□ 0.99
Vti1aO89116 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Vti1aO89116 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Vti1aO89116 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vti1aO89116 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vti1aO89116 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vti1aO89116 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vti1aO89116 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vti1aO89116 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.21■□□□□ 0.99
Vti1aO89116 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vti1aO89116 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Vti1aO89116 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
Vti1aO89116 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.21■□□□□ 0.99
Vti1aO89116 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.21■□□□□ 0.99
Vti1aO89116 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Vti1aO89116 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vti1aO89116 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Vti1aO89116 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vti1aO89116 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Vti1aO89116 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Vti1aO89116 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Vti1aO89116 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Vti1aO89116 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Vti1aO89116 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.2■□□□□ 0.98
Vti1aO89116 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.2■□□□□ 0.98
Vti1aO89116 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vti1aO89116 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vti1aO89116 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Vti1aO89116 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Vti1aO89116 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vti1aO89116 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Vti1aO89116 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Vti1aO89116 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.19■□□□□ 0.98
Vti1aO89116 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Vti1aO89116 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vti1aO89116 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vti1aO89116 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.19■□□□□ 0.98
Vti1aO89116 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vti1aO89116 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Vti1aO89116 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vti1aO89116 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vti1aO89116 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.18■□□□□ 0.98
Vti1aO89116 Gm42778-201ENSMUST00000199644 553 ntBASIC21.18■□□□□ 0.98
Vti1aO89116 Gm18671-201ENSMUST00000214826 683 ntBASIC21.18■□□□□ 0.98
Vti1aO89116 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.18■□□□□ 0.98
Vti1aO89116 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vti1aO89116 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms