Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CcnkO88874 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CcnkO88874 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CcnkO88874 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
CcnkO88874 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CcnkO88874 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CcnkO88874 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CcnkO88874 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CcnkO88874 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CcnkO88874 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CcnkO88874 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CcnkO88874 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CcnkO88874 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
CcnkO88874 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CcnkO88874 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CcnkO88874 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CcnkO88874 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CcnkO88874 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.38■□□□□ 0.37
CcnkO88874 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CcnkO88874 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.38■□□□□ 0.37
CcnkO88874 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.38■□□□□ 0.37
CcnkO88874 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CcnkO88874 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.38■□□□□ 0.37
CcnkO88874 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.38■□□□□ 0.37
CcnkO88874 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CcnkO88874 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CcnkO88874 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CcnkO88874 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.37■□□□□ 0.37
CcnkO88874 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CcnkO88874 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.37■□□□□ 0.37
CcnkO88874 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CcnkO88874 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.37■□□□□ 0.37
CcnkO88874 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CcnkO88874 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.37■□□□□ 0.37
CcnkO88874 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
CcnkO88874 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CcnkO88874 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CcnkO88874 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CcnkO88874 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.36■□□□□ 0.37
CcnkO88874 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CcnkO88874 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.36■□□□□ 0.37
CcnkO88874 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CcnkO88874 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CcnkO88874 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CcnkO88874 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CcnkO88874 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CcnkO88874 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CcnkO88874 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.36■□□□□ 0.37
CcnkO88874 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CcnkO88874 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.36■□□□□ 0.37
CcnkO88874 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CcnkO88874 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CcnkO88874 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CcnkO88874 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CcnkO88874 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CcnkO88874 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CcnkO88874 Gm40881-201ENSMUST00000223397 166 ntBASIC17.35■□□□□ 0.37
CcnkO88874 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CcnkO88874 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.35■□□□□ 0.37
CcnkO88874 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CcnkO88874 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CcnkO88874 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CcnkO88874 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CcnkO88874 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.34■□□□□ 0.37
CcnkO88874 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CcnkO88874 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CcnkO88874 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CcnkO88874 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CcnkO88874 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CcnkO88874 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CcnkO88874 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CcnkO88874 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.33■□□□□ 0.37
CcnkO88874 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CcnkO88874 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CcnkO88874 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CcnkO88874 Gm15546-201ENSMUST00000122095 826 ntBASIC17.33■□□□□ 0.36
CcnkO88874 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CcnkO88874 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CcnkO88874 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CcnkO88874 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CcnkO88874 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CcnkO88874 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CcnkO88874 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CcnkO88874 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.32■□□□□ 0.36
CcnkO88874 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CcnkO88874 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CcnkO88874 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CcnkO88874 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CcnkO88874 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CcnkO88874 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.32■□□□□ 0.36
CcnkO88874 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CcnkO88874 Gm15820-201ENSMUST00000201566 728 ntBASIC17.32■□□□□ 0.36
CcnkO88874 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CcnkO88874 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CcnkO88874 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CcnkO88874 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CcnkO88874 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CcnkO88874 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.31■□□□□ 0.36
CcnkO88874 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CcnkO88874 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms