Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Best1O88870 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Best1O88870 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Best1O88870 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Best1O88870 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.09■□□□□ 0.65
Best1O88870 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.09■□□□□ 0.65
Best1O88870 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Best1O88870 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Best1O88870 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Best1O88870 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Best1O88870 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Best1O88870 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.08■□□□□ 0.64
Best1O88870 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Best1O88870 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.08■□□□□ 0.64
Best1O88870 AA386476-201ENSMUST00000098781 1665 ntBASIC19.08■□□□□ 0.64
Best1O88870 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Best1O88870 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.07■□□□□ 0.64
Best1O88870 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Best1O88870 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.07■□□□□ 0.64
Best1O88870 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Best1O88870 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.06■□□□□ 0.64
Best1O88870 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Best1O88870 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Best1O88870 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Best1O88870 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Best1O88870 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Best1O88870 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
Best1O88870 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Best1O88870 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Best1O88870 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Best1O88870 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Best1O88870 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Best1O88870 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Best1O88870 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Best1O88870 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Best1O88870 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.04■□□□□ 0.64
Best1O88870 Gm42642-201ENSMUST00000200683 355 ntBASIC19.04■□□□□ 0.64
Best1O88870 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Best1O88870 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.04■□□□□ 0.64
Best1O88870 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Best1O88870 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Best1O88870 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Best1O88870 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Best1O88870 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Best1O88870 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Best1O88870 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.03■□□□□ 0.64
Best1O88870 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.03■□□□□ 0.64
Best1O88870 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.03■□□□□ 0.64
Best1O88870 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.03■□□□□ 0.64
Best1O88870 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Best1O88870 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Best1O88870 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Best1O88870 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Best1O88870 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Best1O88870 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Best1O88870 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Best1O88870 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Best1O88870 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Best1O88870 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Best1O88870 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Best1O88870 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.01■□□□□ 0.63
Best1O88870 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.01■□□□□ 0.63
Best1O88870 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Best1O88870 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
Best1O88870 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Best1O88870 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Best1O88870 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.01■□□□□ 0.63
Best1O88870 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Best1O88870 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Best1O88870 Gm42911-201ENSMUST00000199360 1630 ntBASIC19■□□□□ 0.63
Best1O88870 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Best1O88870 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19■□□□□ 0.63
Best1O88870 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Best1O88870 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Best1O88870 Slc35b2-207ENSMUST00000226086 850 ntBASIC19■□□□□ 0.63
Best1O88870 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19■□□□□ 0.63
Best1O88870 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Best1O88870 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Best1O88870 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Best1O88870 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Best1O88870 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Best1O88870 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Best1O88870 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19■□□□□ 0.63
Best1O88870 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Best1O88870 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Best1O88870 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Best1O88870 Gm10849-201ENSMUST00000100397 618 ntBASIC18.99■□□□□ 0.63
Best1O88870 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.99■□□□□ 0.63
Best1O88870 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Best1O88870 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.99■□□□□ 0.63
Best1O88870 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.99■□□□□ 0.63
Best1O88870 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.99■□□□□ 0.63
Best1O88870 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Best1O88870 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Best1O88870 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Best1O88870 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Best1O88870 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.99■□□□□ 0.63
Best1O88870 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Best1O88870 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Best1O88870 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms