Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ShdO88834 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ShdO88834 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.2■□□□□ 0.82
ShdO88834 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ShdO88834 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.2■□□□□ 0.82
ShdO88834 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ShdO88834 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ShdO88834 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ShdO88834 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.2■□□□□ 0.82
ShdO88834 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ShdO88834 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ShdO88834 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ShdO88834 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ShdO88834 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.19■□□□□ 0.82
ShdO88834 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ShdO88834 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ShdO88834 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ShdO88834 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ShdO88834 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ShdO88834 Golph3-202ENSMUST00000226517 2359 ntBASIC20.19■□□□□ 0.82
ShdO88834 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ShdO88834 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ShdO88834 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.18■□□□□ 0.82
ShdO88834 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ShdO88834 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.18■□□□□ 0.82
ShdO88834 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ShdO88834 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ShdO88834 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ShdO88834 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ShdO88834 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
ShdO88834 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ShdO88834 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
ShdO88834 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ShdO88834 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ShdO88834 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ShdO88834 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ShdO88834 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.18■□□□□ 0.82
ShdO88834 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
ShdO88834 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.17■□□□□ 0.82
ShdO88834 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
ShdO88834 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ShdO88834 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.17■□□□□ 0.82
ShdO88834 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ShdO88834 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ShdO88834 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.17■□□□□ 0.82
ShdO88834 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ShdO88834 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ShdO88834 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.16■□□□□ 0.82
ShdO88834 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ShdO88834 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ShdO88834 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
ShdO88834 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ShdO88834 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ShdO88834 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ShdO88834 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ShdO88834 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ShdO88834 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ShdO88834 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ShdO88834 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ShdO88834 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ShdO88834 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ShdO88834 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ShdO88834 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ShdO88834 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ShdO88834 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ShdO88834 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.14■□□□□ 0.81
ShdO88834 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ShdO88834 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.14■□□□□ 0.81
ShdO88834 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ShdO88834 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.14■□□□□ 0.81
ShdO88834 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ShdO88834 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ShdO88834 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ShdO88834 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.13■□□□□ 0.81
ShdO88834 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ShdO88834 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ShdO88834 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
ShdO88834 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ShdO88834 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
ShdO88834 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ShdO88834 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.13■□□□□ 0.81
ShdO88834 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ShdO88834 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ShdO88834 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ShdO88834 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.12■□□□□ 0.81
ShdO88834 Gm43137-201ENSMUST00000198052 594 ntBASIC20.12■□□□□ 0.81
ShdO88834 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
ShdO88834 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ShdO88834 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ShdO88834 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ShdO88834 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ShdO88834 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ShdO88834 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ShdO88834 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ShdO88834 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ShdO88834 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ShdO88834 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ShdO88834 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ShdO88834 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ShdO88834 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms