Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ClppO88696 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
ClppO88696 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ClppO88696 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ClppO88696 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.14■□□□□ 0.65
ClppO88696 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ClppO88696 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ClppO88696 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ClppO88696 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ClppO88696 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ClppO88696 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ClppO88696 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ClppO88696 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.13■□□□□ 0.65
ClppO88696 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ClppO88696 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ClppO88696 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ClppO88696 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ClppO88696 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ClppO88696 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ClppO88696 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ClppO88696 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ClppO88696 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ClppO88696 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ClppO88696 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.12■□□□□ 0.65
ClppO88696 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ClppO88696 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ClppO88696 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ClppO88696 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ClppO88696 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.12■□□□□ 0.65
ClppO88696 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ClppO88696 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.12■□□□□ 0.65
ClppO88696 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ClppO88696 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ClppO88696 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
ClppO88696 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ClppO88696 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ClppO88696 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
ClppO88696 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.11■□□□□ 0.65
ClppO88696 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ClppO88696 Gm26833-201ENSMUST00000180899 440 ntBASIC19.11■□□□□ 0.65
ClppO88696 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.11■□□□□ 0.65
ClppO88696 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.11■□□□□ 0.65
ClppO88696 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.11■□□□□ 0.65
ClppO88696 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ClppO88696 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.11■□□□□ 0.65
ClppO88696 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ClppO88696 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ClppO88696 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.1■□□□□ 0.65
ClppO88696 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ClppO88696 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ClppO88696 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.1■□□□□ 0.65
ClppO88696 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.1■□□□□ 0.65
ClppO88696 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ClppO88696 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
ClppO88696 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.1■□□□□ 0.65
ClppO88696 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ClppO88696 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ClppO88696 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ClppO88696 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ClppO88696 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
ClppO88696 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.09■□□□□ 0.65
ClppO88696 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
ClppO88696 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.09■□□□□ 0.65
ClppO88696 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ClppO88696 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ClppO88696 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ClppO88696 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ClppO88696 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.09■□□□□ 0.65
ClppO88696 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ClppO88696 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ClppO88696 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
ClppO88696 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ClppO88696 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ClppO88696 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ClppO88696 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ClppO88696 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ClppO88696 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ClppO88696 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ClppO88696 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ClppO88696 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ClppO88696 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.08■□□□□ 0.64
ClppO88696 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ClppO88696 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ClppO88696 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.08■□□□□ 0.64
ClppO88696 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ClppO88696 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ClppO88696 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ClppO88696 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ClppO88696 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ClppO88696 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ClppO88696 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ClppO88696 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ClppO88696 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ClppO88696 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.07■□□□□ 0.64
ClppO88696 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ClppO88696 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ClppO88696 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ClppO88696 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ClppO88696 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.07■□□□□ 0.64
ClppO88696 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms