Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cops3O88543 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.6■□□□□ 0.41
Cops3O88543 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops3O88543 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cops3O88543 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cops3O88543 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cops3O88543 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cops3O88543 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cops3O88543 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Cops3O88543 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Cops3O88543 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cops3O88543 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cops3O88543 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.41
Cops3O88543 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cops3O88543 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cops3O88543 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cops3O88543 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Cops3O88543 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cops3O88543 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.58■□□□□ 0.4
Cops3O88543 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.58■□□□□ 0.4
Cops3O88543 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cops3O88543 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cops3O88543 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cops3O88543 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.58■□□□□ 0.4
Cops3O88543 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cops3O88543 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cops3O88543 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.58■□□□□ 0.4
Cops3O88543 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cops3O88543 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cops3O88543 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops3O88543 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops3O88543 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Cops3O88543 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cops3O88543 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops3O88543 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops3O88543 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops3O88543 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cops3O88543 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cops3O88543 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops3O88543 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops3O88543 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cops3O88543 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cops3O88543 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.57■□□□□ 0.4
Cops3O88543 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops3O88543 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops3O88543 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cops3O88543 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.56■□□□□ 0.4
Cops3O88543 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cops3O88543 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cops3O88543 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cops3O88543 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cops3O88543 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cops3O88543 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cops3O88543 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cops3O88543 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cops3O88543 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cops3O88543 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cops3O88543 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cops3O88543 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cops3O88543 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cops3O88543 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.55■□□□□ 0.4
Cops3O88543 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cops3O88543 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cops3O88543 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Cops3O88543 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cops3O88543 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cops3O88543 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cops3O88543 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cops3O88543 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cops3O88543 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cops3O88543 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cops3O88543 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cops3O88543 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cops3O88543 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cops3O88543 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cops3O88543 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cops3O88543 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cops3O88543 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cops3O88543 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cops3O88543 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.54■□□□□ 0.4
Cops3O88543 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.54■□□□□ 0.4
Cops3O88543 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.54■□□□□ 0.4
Cops3O88543 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cops3O88543 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cops3O88543 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.54■□□□□ 0.4
Cops3O88543 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cops3O88543 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Cops3O88543 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cops3O88543 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.53■□□□□ 0.4
Cops3O88543 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cops3O88543 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cops3O88543 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cops3O88543 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cops3O88543 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Cops3O88543 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cops3O88543 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cops3O88543 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cops3O88543 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.52■□□□□ 0.4
Cops3O88543 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cops3O88543 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms