Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Cacna1hO88427 Dio3-201ENSMUST00000097228 1449 ntBASIC19.5■□□□□ 0.71
Cacna1hO88427 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cacna1hO88427 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cacna1hO88427 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cacna1hO88427 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cacna1hO88427 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cacna1hO88427 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1hO88427 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1hO88427 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.49■□□□□ 0.71
Cacna1hO88427 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1hO88427 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1hO88427 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1hO88427 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1hO88427 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Cacna1hO88427 Gm21362-201ENSMUST00000194272 928 ntBASIC19.49■□□□□ 0.71
Cacna1hO88427 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.49■□□□□ 0.71
Cacna1hO88427 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1hO88427 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1hO88427 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Cacna1hO88427 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.48■□□□□ 0.71
Cacna1hO88427 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1hO88427 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.48■□□□□ 0.71
Cacna1hO88427 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1hO88427 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1hO88427 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1hO88427 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1hO88427 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1hO88427 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1hO88427 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cacna1hO88427 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Cacna1hO88427 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.47■□□□□ 0.71
Cacna1hO88427 Gm10231-201ENSMUST00000181584 441 ntBASIC19.47■□□□□ 0.71
Cacna1hO88427 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1hO88427 Gm10175-202ENSMUST00000208752 441 ntBASIC19.47■□□□□ 0.71
Cacna1hO88427 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.47■□□□□ 0.71
Cacna1hO88427 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1hO88427 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Cacna1hO88427 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1hO88427 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1hO88427 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1hO88427 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.46■□□□□ 0.71
Cacna1hO88427 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1hO88427 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1hO88427 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1hO88427 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.46■□□□□ 0.71
Cacna1hO88427 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.46■□□□□ 0.71
Cacna1hO88427 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1hO88427 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1hO88427 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.46■□□□□ 0.71
Cacna1hO88427 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1hO88427 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Cacna1hO88427 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1hO88427 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1hO88427 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.46■□□□□ 0.71
Cacna1hO88427 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.46■□□□□ 0.71
Cacna1hO88427 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.46■□□□□ 0.71
Cacna1hO88427 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.46■□□□□ 0.71
Cacna1hO88427 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1hO88427 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cacna1hO88427 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cacna1hO88427 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.45■□□□□ 0.7
Cacna1hO88427 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cacna1hO88427 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Cacna1hO88427 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Cacna1hO88427 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cacna1hO88427 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Cacna1hO88427 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cacna1hO88427 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cacna1hO88427 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1hO88427 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.44■□□□□ 0.7
Cacna1hO88427 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1hO88427 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1hO88427 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1hO88427 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1hO88427 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1hO88427 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cacna1hO88427 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1hO88427 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Cacna1hO88427 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1hO88427 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cacna1hO88427 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1hO88427 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1hO88427 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.43■□□□□ 0.7
Cacna1hO88427 Rab3c-203ENSMUST00000224180 967 ntBASIC19.43■□□□□ 0.7
Cacna1hO88427 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1hO88427 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.42■□□□□ 0.7
Cacna1hO88427 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1hO88427 Gm7367-201ENSMUST00000057611 492 ntBASIC19.42■□□□□ 0.7
Cacna1hO88427 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1hO88427 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1hO88427 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1hO88427 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.42■□□□□ 0.7
Cacna1hO88427 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1hO88427 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Cacna1hO88427 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1hO88427 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Cacna1hO88427 Gm18101-201ENSMUST00000215769 548 ntBASIC19.41■□□□□ 0.7
Cacna1hO88427 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1hO88427 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms