Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.29■□□□□ 0.04
Gm10226O88253 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Gm10226O88253 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm10226O88253 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Gm10226O88253 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.29■□□□□ 0.04
Gm10226O88253 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.28■□□□□ 0.04
Gm10226O88253 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.28■□□□□ 0.04
Gm10226O88253 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm10226O88253 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Gm10226O88253 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm10226O88253 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm10226O88253 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm10226O88253 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm10226O88253 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.28■□□□□ 0.04
Gm10226O88253 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm10226O88253 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm10226O88253 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Gm10226O88253 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC15.28■□□□□ 0.04
Gm10226O88253 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm10226O88253 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm10226O88253 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm10226O88253 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm10226O88253 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm10226O88253 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Gm10226O88253 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Gm10226O88253 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm10226O88253 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm10226O88253 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Gm10226O88253 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Gm10226O88253 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Gm10226O88253 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm10226O88253 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm10226O88253 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.27■□□□□ 0.04
Gm10226O88253 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm10226O88253 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.27■□□□□ 0.04
Gm10226O88253 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.27■□□□□ 0.04
Gm10226O88253 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.27■□□□□ 0.04
Gm10226O88253 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm10226O88253 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm10226O88253 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm10226O88253 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm10226O88253 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm10226O88253 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm10226O88253 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm10226O88253 Gm6277-202ENSMUST00000224036 2779 ntBASIC15.26■□□□□ 0.03
Gm10226O88253 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm10226O88253 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm10226O88253 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.26■□□□□ 0.03
Gm10226O88253 Gm18284-201ENSMUST00000172604 624 ntBASIC15.26■□□□□ 0.03
Gm10226O88253 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.26■□□□□ 0.03
Gm10226O88253 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Gm10226O88253 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.26■□□□□ 0.03
Gm10226O88253 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm10226O88253 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm10226O88253 Gm38160-201ENSMUST00000193090 2499 ntBASIC15.26■□□□□ 0.03
Gm10226O88253 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm10226O88253 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm10226O88253 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Gm10226O88253 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Gm10226O88253 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm10226O88253 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm10226O88253 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm10226O88253 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm10226O88253 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm10226O88253 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm10226O88253 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gm10226O88253 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Gm10226O88253 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm10226O88253 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gm10226O88253 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm10226O88253 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm10226O88253 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Gm10226O88253 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm10226O88253 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm10226O88253 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm10226O88253 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm10226O88253 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm10226O88253 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Gm10226O88253 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.25■□□□□ 0.03
Gm10226O88253 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm10226O88253 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Gm10226O88253 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Gm10226O88253 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Gm10226O88253 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm10226O88253 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm10226O88253 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm10226O88253 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm10226O88253 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm10226O88253 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm10226O88253 AA386476-201ENSMUST00000098781 1665 ntBASIC15.23■□□□□ 0.03
Gm10226O88253 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.23■□□□□ 0.03
Gm10226O88253 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Gm10226O88253 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm10226O88253 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.23■□□□□ 0.03
Gm10226O88253 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.23■□□□□ 0.03
Gm10226O88253 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm10226O88253 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Gm10226O88253 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.23■□□□□ 0.03
Gm10226O88253 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Gm10226O88253 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms