Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Pdlim1O70400 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdlim1O70400 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdlim1O70400 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdlim1O70400 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.52■□□□□ 0.72
Pdlim1O70400 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pdlim1O70400 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Pdlim1O70400 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pdlim1O70400 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.52■□□□□ 0.72
Pdlim1O70400 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdlim1O70400 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.51■□□□□ 0.71
Pdlim1O70400 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Pdlim1O70400 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pdlim1O70400 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdlim1O70400 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pdlim1O70400 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdlim1O70400 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pdlim1O70400 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pdlim1O70400 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdlim1O70400 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdlim1O70400 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdlim1O70400 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdlim1O70400 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.51■□□□□ 0.71
Pdlim1O70400 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pdlim1O70400 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pdlim1O70400 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pdlim1O70400 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pdlim1O70400 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pdlim1O70400 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
Pdlim1O70400 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Pdlim1O70400 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pdlim1O70400 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pdlim1O70400 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Pdlim1O70400 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.49■□□□□ 0.71
Pdlim1O70400 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pdlim1O70400 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pdlim1O70400 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pdlim1O70400 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pdlim1O70400 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Pdlim1O70400 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pdlim1O70400 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pdlim1O70400 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pdlim1O70400 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pdlim1O70400 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.49■□□□□ 0.71
Pdlim1O70400 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pdlim1O70400 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Pdlim1O70400 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pdlim1O70400 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pdlim1O70400 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pdlim1O70400 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pdlim1O70400 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Pdlim1O70400 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Pdlim1O70400 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pdlim1O70400 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.48■□□□□ 0.71
Pdlim1O70400 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pdlim1O70400 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pdlim1O70400 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pdlim1O70400 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pdlim1O70400 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pdlim1O70400 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.47■□□□□ 0.71
Pdlim1O70400 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Pdlim1O70400 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pdlim1O70400 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pdlim1O70400 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pdlim1O70400 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.47■□□□□ 0.71
Pdlim1O70400 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pdlim1O70400 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pdlim1O70400 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Pdlim1O70400 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pdlim1O70400 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pdlim1O70400 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Pdlim1O70400 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Pdlim1O70400 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pdlim1O70400 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pdlim1O70400 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.46■□□□□ 0.71
Pdlim1O70400 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pdlim1O70400 Smad6-203ENSMUST00000179458 273 ntBASIC19.46■□□□□ 0.71
Pdlim1O70400 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pdlim1O70400 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pdlim1O70400 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Pdlim1O70400 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pdlim1O70400 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pdlim1O70400 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Pdlim1O70400 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pdlim1O70400 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdlim1O70400 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdlim1O70400 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdlim1O70400 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pdlim1O70400 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.45■□□□□ 0.7
Pdlim1O70400 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdlim1O70400 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Pdlim1O70400 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Pdlim1O70400 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pdlim1O70400 AA386476-201ENSMUST00000098781 1665 ntBASIC19.44■□□□□ 0.7
Pdlim1O70400 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pdlim1O70400 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pdlim1O70400 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pdlim1O70400 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.44■□□□□ 0.7
Pdlim1O70400 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pdlim1O70400 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms