Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Kcnu1O54982 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Kcnu1O54982 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.06■□□□□ 0.96
Kcnu1O54982 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Kcnu1O54982 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Kcnu1O54982 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Kcnu1O54982 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.06■□□□□ 0.96
Kcnu1O54982 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Kcnu1O54982 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Kcnu1O54982 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Kcnu1O54982 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Kcnu1O54982 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Kcnu1O54982 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.05■□□□□ 0.96
Kcnu1O54982 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.05■□□□□ 0.96
Kcnu1O54982 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Kcnu1O54982 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Kcnu1O54982 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Kcnu1O54982 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Kcnu1O54982 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Kcnu1O54982 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Kcnu1O54982 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Kcnu1O54982 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Kcnu1O54982 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Kcnu1O54982 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Kcnu1O54982 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Kcnu1O54982 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.03■□□□□ 0.96
Kcnu1O54982 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.03■□□□□ 0.96
Kcnu1O54982 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.03■□□□□ 0.96
Kcnu1O54982 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Kcnu1O54982 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Kcnu1O54982 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Kcnu1O54982 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Kcnu1O54982 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Kcnu1O54982 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.02■□□□□ 0.96
Kcnu1O54982 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Kcnu1O54982 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Kcnu1O54982 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
Kcnu1O54982 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Kcnu1O54982 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Kcnu1O54982 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Kcnu1O54982 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Kcnu1O54982 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Kcnu1O54982 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Kcnu1O54982 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Kcnu1O54982 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.01■□□□□ 0.95
Kcnu1O54982 Golgb1-201ENSMUST00000023534 498 ntBASIC21.01■□□□□ 0.95
Kcnu1O54982 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Kcnu1O54982 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Kcnu1O54982 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.01■□□□□ 0.95
Kcnu1O54982 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Kcnu1O54982 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Kcnu1O54982 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Kcnu1O54982 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21■□□□□ 0.95
Kcnu1O54982 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21■□□□□ 0.95
Kcnu1O54982 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Kcnu1O54982 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Kcnu1O54982 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Kcnu1O54982 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Kcnu1O54982 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Kcnu1O54982 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.99■□□□□ 0.95
Kcnu1O54982 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Kcnu1O54982 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Kcnu1O54982 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Kcnu1O54982 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Kcnu1O54982 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Kcnu1O54982 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Kcnu1O54982 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Kcnu1O54982 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Kcnu1O54982 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Kcnu1O54982 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Kcnu1O54982 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Kcnu1O54982 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.98■□□□□ 0.95
Kcnu1O54982 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Kcnu1O54982 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Kcnu1O54982 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Kcnu1O54982 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Kcnu1O54982 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Kcnu1O54982 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.97■□□□□ 0.95
Kcnu1O54982 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Kcnu1O54982 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.97■□□□□ 0.95
Kcnu1O54982 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Kcnu1O54982 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Kcnu1O54982 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Kcnu1O54982 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Kcnu1O54982 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.96■□□□□ 0.95
Kcnu1O54982 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Kcnu1O54982 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Kcnu1O54982 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Kcnu1O54982 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Kcnu1O54982 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Kcnu1O54982 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Kcnu1O54982 Gm12922-201ENSMUST00000120626 809 ntBASIC20.95■□□□□ 0.94
Kcnu1O54982 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.95■□□□□ 0.94
Kcnu1O54982 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Kcnu1O54982 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.95■□□□□ 0.94
Kcnu1O54982 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.95■□□□□ 0.94
Kcnu1O54982 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Kcnu1O54982 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Kcnu1O54982 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Kcnu1O54982 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms