Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Per2O54943 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Per2O54943 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Per2O54943 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Per2O54943 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Per2O54943 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.54■□□□□ 0.88
Per2O54943 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Per2O54943 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Per2O54943 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Per2O54943 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Per2O54943 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.54■□□□□ 0.88
Per2O54943 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Per2O54943 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Per2O54943 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Per2O54943 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Per2O54943 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Per2O54943 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Per2O54943 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.53■□□□□ 0.88
Per2O54943 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Per2O54943 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Per2O54943 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Per2O54943 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Per2O54943 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Per2O54943 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Per2O54943 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Per2O54943 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Per2O54943 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Per2O54943 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.52■□□□□ 0.88
Per2O54943 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Per2O54943 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Per2O54943 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Per2O54943 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
Per2O54943 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Per2O54943 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Per2O54943 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Per2O54943 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Per2O54943 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.51■□□□□ 0.87
Per2O54943 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Per2O54943 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Per2O54943 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.5■□□□□ 0.87
Per2O54943 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Per2O54943 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Per2O54943 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Per2O54943 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.49■□□□□ 0.87
Per2O54943 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Per2O54943 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.49■□□□□ 0.87
Per2O54943 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Per2O54943 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Per2O54943 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Per2O54943 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Per2O54943 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Per2O54943 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Per2O54943 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.49■□□□□ 0.87
Per2O54943 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Per2O54943 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Per2O54943 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Per2O54943 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Per2O54943 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Per2O54943 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Per2O54943 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Per2O54943 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Per2O54943 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.48■□□□□ 0.87
Per2O54943 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Per2O54943 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Per2O54943 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Per2O54943 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Per2O54943 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Per2O54943 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Per2O54943 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Per2O54943 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Per2O54943 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.48■□□□□ 0.87
Per2O54943 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Per2O54943 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.47■□□□□ 0.87
Per2O54943 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Per2O54943 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.47■□□□□ 0.87
Per2O54943 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Per2O54943 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Per2O54943 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.47■□□□□ 0.87
Per2O54943 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Per2O54943 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Per2O54943 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.47■□□□□ 0.87
Per2O54943 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Per2O54943 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Per2O54943 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Per2O54943 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Per2O54943 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Per2O54943 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Per2O54943 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.46■□□□□ 0.87
Per2O54943 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Per2O54943 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Per2O54943 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Per2O54943 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Per2O54943 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Per2O54943 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Per2O54943 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Per2O54943 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Per2O54943 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Per2O54943 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Per2O54943 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Per2O54943 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms