Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn5O54942 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Cldn5O54942 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn5O54942 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Cldn5O54942 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cldn5O54942 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn5O54942 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn5O54942 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Cldn5O54942 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Cldn5O54942 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn5O54942 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn5O54942 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn5O54942 Gm8495-201ENSMUST00000188740 694 ntBASIC20.55■□□□□ 0.88
Cldn5O54942 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.55■□□□□ 0.88
Cldn5O54942 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn5O54942 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn5O54942 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.55■□□□□ 0.88
Cldn5O54942 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn5O54942 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn5O54942 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.54■□□□□ 0.88
Cldn5O54942 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.54■□□□□ 0.88
Cldn5O54942 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn5O54942 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Cldn5O54942 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn5O54942 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn5O54942 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn5O54942 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cldn5O54942 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn5O54942 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.53■□□□□ 0.88
Cldn5O54942 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn5O54942 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn5O54942 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn5O54942 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn5O54942 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Cldn5O54942 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cldn5O54942 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cldn5O54942 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cldn5O54942 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cldn5O54942 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Cldn5O54942 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cldn5O54942 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cldn5O54942 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Cldn5O54942 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cldn5O54942 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Cldn5O54942 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cldn5O54942 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn5O54942 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn5O54942 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn5O54942 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.51■□□□□ 0.87
Cldn5O54942 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn5O54942 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn5O54942 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.51■□□□□ 0.87
Cldn5O54942 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn5O54942 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.51■□□□□ 0.87
Cldn5O54942 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Cldn5O54942 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn5O54942 Gm5874-201ENSMUST00000096101 508 ntBASIC20.51■□□□□ 0.87
Cldn5O54942 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.51■□□□□ 0.87
Cldn5O54942 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.51■□□□□ 0.87
Cldn5O54942 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn5O54942 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn5O54942 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cldn5O54942 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.5■□□□□ 0.87
Cldn5O54942 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cldn5O54942 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cldn5O54942 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.5■□□□□ 0.87
Cldn5O54942 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cldn5O54942 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.5■□□□□ 0.87
Cldn5O54942 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Cldn5O54942 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cldn5O54942 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cldn5O54942 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cldn5O54942 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn5O54942 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cldn5O54942 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
Cldn5O54942 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.49■□□□□ 0.87
Cldn5O54942 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.49■□□□□ 0.87
Cldn5O54942 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn5O54942 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn5O54942 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn5O54942 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn5O54942 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn5O54942 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn5O54942 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn5O54942 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn5O54942 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn5O54942 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn5O54942 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cldn5O54942 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.48■□□□□ 0.87
Cldn5O54942 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Cldn5O54942 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Cldn5O54942 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cldn5O54942 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cldn5O54942 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cldn5O54942 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cldn5O54942 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cldn5O54942 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cldn5O54942 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cldn5O54942 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cldn5O54942 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms