Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.86■□□□□ 0.29
DffbO54788 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
DffbO54788 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.86■□□□□ 0.29
DffbO54788 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DffbO54788 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
DffbO54788 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
DffbO54788 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
DffbO54788 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DffbO54788 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
DffbO54788 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
DffbO54788 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
DffbO54788 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DffbO54788 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.85■□□□□ 0.29
DffbO54788 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.85■□□□□ 0.29
DffbO54788 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
DffbO54788 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DffbO54788 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
DffbO54788 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
DffbO54788 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
DffbO54788 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.85■□□□□ 0.29
DffbO54788 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
DffbO54788 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
DffbO54788 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DffbO54788 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DffbO54788 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
DffbO54788 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
DffbO54788 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
DffbO54788 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
DffbO54788 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DffbO54788 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
DffbO54788 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.84■□□□□ 0.29
DffbO54788 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
DffbO54788 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
DffbO54788 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DffbO54788 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DffbO54788 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
DffbO54788 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
DffbO54788 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DffbO54788 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
DffbO54788 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
DffbO54788 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
DffbO54788 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.83■□□□□ 0.28
DffbO54788 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.83■□□□□ 0.28
DffbO54788 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DffbO54788 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
DffbO54788 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DffbO54788 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DffbO54788 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DffbO54788 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
DffbO54788 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DffbO54788 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DffbO54788 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DffbO54788 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DffbO54788 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DffbO54788 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
DffbO54788 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
DffbO54788 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
DffbO54788 Gm40881-201ENSMUST00000223397 166 ntBASIC16.82■□□□□ 0.28
DffbO54788 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
DffbO54788 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DffbO54788 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
DffbO54788 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
DffbO54788 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
DffbO54788 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
DffbO54788 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DffbO54788 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DffbO54788 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
DffbO54788 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DffbO54788 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DffbO54788 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
DffbO54788 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DffbO54788 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DffbO54788 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
DffbO54788 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.81■□□□□ 0.28
DffbO54788 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
DffbO54788 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DffbO54788 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
DffbO54788 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DffbO54788 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
DffbO54788 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DffbO54788 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DffbO54788 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
DffbO54788 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DffbO54788 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DffbO54788 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DffbO54788 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DffbO54788 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.79■□□□□ 0.28
DffbO54788 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DffbO54788 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
DffbO54788 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DffbO54788 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.79■□□□□ 0.28
DffbO54788 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
DffbO54788 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
DffbO54788 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DffbO54788 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DffbO54788 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DffbO54788 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DffbO54788 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.78■□□□□ 0.28
DffbO54788 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DffbO54788 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms