Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm2O35900 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm2O35900 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm2O35900 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm2O35900 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm2O35900 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm2O35900 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Lsm2O35900 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm2O35900 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm2O35900 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Lsm2O35900 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lsm2O35900 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Lsm2O35900 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm2O35900 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Lsm2O35900 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Lsm2O35900 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm2O35900 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Lsm2O35900 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Lsm2O35900 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Lsm2O35900 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.58■□□□□ 0.4
Lsm2O35900 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm2O35900 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm2O35900 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm2O35900 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm2O35900 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm2O35900 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm2O35900 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm2O35900 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm2O35900 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm2O35900 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Lsm2O35900 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm2O35900 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm2O35900 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm2O35900 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Lsm2O35900 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Lsm2O35900 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Lsm2O35900 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm2O35900 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm2O35900 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm2O35900 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm2O35900 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.56■□□□□ 0.4
Lsm2O35900 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.56■□□□□ 0.4
Lsm2O35900 Gm11175-201ENSMUST00000116172 543 ntBASIC17.56■□□□□ 0.4
Lsm2O35900 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm2O35900 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Lsm2O35900 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm2O35900 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.56■□□□□ 0.4
Lsm2O35900 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm2O35900 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm2O35900 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm2O35900 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Lsm2O35900 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.55■□□□□ 0.4
Lsm2O35900 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm2O35900 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.55■□□□□ 0.4
Lsm2O35900 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.55■□□□□ 0.4
Lsm2O35900 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.55■□□□□ 0.4
Lsm2O35900 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm2O35900 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm2O35900 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Lsm2O35900 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm2O35900 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm2O35900 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm2O35900 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm2O35900 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm2O35900 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.54■□□□□ 0.4
Lsm2O35900 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm2O35900 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm2O35900 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Lsm2O35900 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm2O35900 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.54■□□□□ 0.4
Lsm2O35900 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm2O35900 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm2O35900 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm2O35900 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm2O35900 Gm7143-201ENSMUST00000222811 859 ntBASIC17.53■□□□□ 0.4
Lsm2O35900 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm2O35900 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Lsm2O35900 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Lsm2O35900 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm2O35900 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lsm2O35900 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lsm2O35900 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lsm2O35900 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lsm2O35900 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lsm2O35900 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.52■□□□□ 0.4
Lsm2O35900 Gm12366-201ENSMUST00000121722 873 ntBASIC17.52■□□□□ 0.4
Lsm2O35900 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.52■□□□□ 0.4
Lsm2O35900 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.52■□□□□ 0.4
Lsm2O35900 Gm5786-201ENSMUST00000085368 882 ntBASIC17.52■□□□□ 0.4
Lsm2O35900 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Lsm2O35900 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Lsm2O35900 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm2O35900 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm2O35900 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Lsm2O35900 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm2O35900 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm2O35900 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm2O35900 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm2O35900 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm2O35900 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms