Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Sptlc1O35704 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sptlc1O35704 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.65■■□□□ 1.06
Sptlc1O35704 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.65■■□□□ 1.06
Sptlc1O35704 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sptlc1O35704 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Sptlc1O35704 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sptlc1O35704 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
Sptlc1O35704 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.65■■□□□ 1.06
Sptlc1O35704 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sptlc1O35704 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sptlc1O35704 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sptlc1O35704 Gm13234-201ENSMUST00000120010 747 ntBASIC21.64■■□□□ 1.05
Sptlc1O35704 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Sptlc1O35704 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Sptlc1O35704 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Sptlc1O35704 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sptlc1O35704 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sptlc1O35704 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
Sptlc1O35704 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sptlc1O35704 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Sptlc1O35704 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sptlc1O35704 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.63■■□□□ 1.05
Sptlc1O35704 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.63■■□□□ 1.05
Sptlc1O35704 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sptlc1O35704 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sptlc1O35704 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sptlc1O35704 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.63■■□□□ 1.05
Sptlc1O35704 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sptlc1O35704 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sptlc1O35704 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sptlc1O35704 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.63■■□□□ 1.05
Sptlc1O35704 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sptlc1O35704 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sptlc1O35704 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sptlc1O35704 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Sptlc1O35704 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sptlc1O35704 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sptlc1O35704 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sptlc1O35704 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sptlc1O35704 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sptlc1O35704 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.61■■□□□ 1.05
Sptlc1O35704 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.61■■□□□ 1.05
Sptlc1O35704 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.61■■□□□ 1.05
Sptlc1O35704 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sptlc1O35704 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sptlc1O35704 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Sptlc1O35704 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sptlc1O35704 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Sptlc1O35704 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Sptlc1O35704 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sptlc1O35704 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.6■■□□□ 1.05
Sptlc1O35704 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sptlc1O35704 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sptlc1O35704 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.59■■□□□ 1.05
Sptlc1O35704 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Sptlc1O35704 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sptlc1O35704 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sptlc1O35704 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sptlc1O35704 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Sptlc1O35704 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sptlc1O35704 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.58■■□□□ 1.05
Sptlc1O35704 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sptlc1O35704 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Sptlc1O35704 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sptlc1O35704 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Sptlc1O35704 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sptlc1O35704 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Sptlc1O35704 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sptlc1O35704 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Sptlc1O35704 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.57■■□□□ 1.04
Sptlc1O35704 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Sptlc1O35704 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sptlc1O35704 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sptlc1O35704 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Sptlc1O35704 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.56■■□□□ 1.04
Sptlc1O35704 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sptlc1O35704 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.56■■□□□ 1.04
Sptlc1O35704 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.56■■□□□ 1.04
Sptlc1O35704 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sptlc1O35704 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sptlc1O35704 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sptlc1O35704 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sptlc1O35704 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Sptlc1O35704 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
Sptlc1O35704 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sptlc1O35704 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sptlc1O35704 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Sptlc1O35704 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.55■■□□□ 1.04
Sptlc1O35704 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Sptlc1O35704 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sptlc1O35704 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Sptlc1O35704 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Sptlc1O35704 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Sptlc1O35704 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sptlc1O35704 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sptlc1O35704 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.54■■□□□ 1.04
Sptlc1O35704 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sptlc1O35704 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sptlc1O35704 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms