Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Npc1O35604 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Npc1O35604 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Npc1O35604 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Npc1O35604 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.23■□□□□ 0.67
Npc1O35604 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Npc1O35604 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Npc1O35604 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Npc1O35604 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Npc1O35604 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.23■□□□□ 0.67
Npc1O35604 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Npc1O35604 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Npc1O35604 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.23■□□□□ 0.67
Npc1O35604 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Npc1O35604 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Npc1O35604 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Npc1O35604 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Npc1O35604 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Npc1O35604 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Npc1O35604 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.22■□□□□ 0.67
Npc1O35604 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Npc1O35604 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Npc1O35604 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.22■□□□□ 0.67
Npc1O35604 Gm43173-201ENSMUST00000202246 593 ntBASIC19.22■□□□□ 0.67
Npc1O35604 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Npc1O35604 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Npc1O35604 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Npc1O35604 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Npc1O35604 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Npc1O35604 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.22■□□□□ 0.67
Npc1O35604 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Npc1O35604 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Npc1O35604 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Npc1O35604 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Npc1O35604 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Npc1O35604 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.21■□□□□ 0.67
Npc1O35604 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Npc1O35604 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Npc1O35604 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Npc1O35604 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Npc1O35604 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Npc1O35604 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Npc1O35604 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Npc1O35604 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.2■□□□□ 0.66
Npc1O35604 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.2■□□□□ 0.66
Npc1O35604 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.2■□□□□ 0.66
Npc1O35604 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Npc1O35604 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Npc1O35604 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Npc1O35604 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Npc1O35604 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Npc1O35604 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.2■□□□□ 0.66
Npc1O35604 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Npc1O35604 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Npc1O35604 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Npc1O35604 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Npc1O35604 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Npc1O35604 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Npc1O35604 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Npc1O35604 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Npc1O35604 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Npc1O35604 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Npc1O35604 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
Npc1O35604 Gm12251-201ENSMUST00000117893 792 ntBASIC19.19■□□□□ 0.66
Npc1O35604 Gm43017-201ENSMUST00000198296 752 ntBASIC19.19■□□□□ 0.66
Npc1O35604 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Npc1O35604 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Npc1O35604 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Npc1O35604 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Npc1O35604 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Npc1O35604 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Npc1O35604 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Npc1O35604 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Npc1O35604 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Npc1O35604 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Npc1O35604 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Npc1O35604 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Npc1O35604 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Npc1O35604 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Npc1O35604 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Npc1O35604 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Npc1O35604 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Npc1O35604 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Npc1O35604 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Npc1O35604 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Npc1O35604 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.17■□□□□ 0.66
Npc1O35604 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.17■□□□□ 0.66
Npc1O35604 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Npc1O35604 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Npc1O35604 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Npc1O35604 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Npc1O35604 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Npc1O35604 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Npc1O35604 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Npc1O35604 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Npc1O35604 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Npc1O35604 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npc1O35604 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npc1O35604 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npc1O35604 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms