Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Abca4O35600 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Abca4O35600 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Abca4O35600 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.86■□□□□ 0.61
Abca4O35600 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Abca4O35600 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.86■□□□□ 0.61
Abca4O35600 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Abca4O35600 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Abca4O35600 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Abca4O35600 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Abca4O35600 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.86■□□□□ 0.61
Abca4O35600 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Abca4O35600 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Abca4O35600 Mir1199-201ENSMUST00000117015 119 ntBASIC18.85■□□□□ 0.61
Abca4O35600 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Abca4O35600 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.85■□□□□ 0.61
Abca4O35600 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Abca4O35600 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Abca4O35600 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Abca4O35600 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Abca4O35600 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Abca4O35600 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Abca4O35600 Gm13534-201ENSMUST00000121169 513 ntBASIC18.85■□□□□ 0.61
Abca4O35600 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Abca4O35600 Gm18101-201ENSMUST00000215769 548 ntBASIC18.85■□□□□ 0.61
Abca4O35600 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Abca4O35600 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Abca4O35600 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Abca4O35600 Gm10517-202ENSMUST00000192970 758 ntBASIC18.84■□□□□ 0.61
Abca4O35600 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Abca4O35600 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Abca4O35600 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Abca4O35600 Gm43799-201ENSMUST00000201845 579 ntBASIC18.83■□□□□ 0.61
Abca4O35600 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.83■□□□□ 0.6
Abca4O35600 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Abca4O35600 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Abca4O35600 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Abca4O35600 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.83■□□□□ 0.6
Abca4O35600 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Abca4O35600 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Abca4O35600 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Abca4O35600 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Abca4O35600 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Abca4O35600 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Abca4O35600 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Abca4O35600 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Abca4O35600 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Abca4O35600 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Abca4O35600 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.82■□□□□ 0.6
Abca4O35600 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.82■□□□□ 0.6
Abca4O35600 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Abca4O35600 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Abca4O35600 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Abca4O35600 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Abca4O35600 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Abca4O35600 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abca4O35600 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.8■□□□□ 0.6
Abca4O35600 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.8■□□□□ 0.6
Abca4O35600 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Abca4O35600 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.8■□□□□ 0.6
Abca4O35600 Rab3c-203ENSMUST00000224180 967 ntBASIC18.8■□□□□ 0.6
Abca4O35600 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.8■□□□□ 0.6
Abca4O35600 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abca4O35600 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abca4O35600 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abca4O35600 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abca4O35600 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.8■□□□□ 0.6
Abca4O35600 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abca4O35600 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abca4O35600 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abca4O35600 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abca4O35600 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abca4O35600 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.79■□□□□ 0.6
Abca4O35600 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abca4O35600 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.79■□□□□ 0.6
Abca4O35600 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Abca4O35600 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.79■□□□□ 0.6
Abca4O35600 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Abca4O35600 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abca4O35600 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abca4O35600 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abca4O35600 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Abca4O35600 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abca4O35600 Gm6659-201ENSMUST00000174752 547 ntBASIC18.79■□□□□ 0.6
Abca4O35600 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.78■□□□□ 0.6
Abca4O35600 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Abca4O35600 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Abca4O35600 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abca4O35600 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abca4O35600 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Abca4O35600 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Abca4O35600 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Abca4O35600 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Abca4O35600 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.77■□□□□ 0.6
Abca4O35600 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
Abca4O35600 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.77■□□□□ 0.6
Abca4O35600 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Abca4O35600 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Abca4O35600 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.77■□□□□ 0.59
Abca4O35600 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms