Protein–RNA interactions for Protein: O09113

Otp, Homeobox protein orthopedia, mousemouse

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtpO09113 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
OtpO09113 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
OtpO09113 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
OtpO09113 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
OtpO09113 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
OtpO09113 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
OtpO09113 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
OtpO09113 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
OtpO09113 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
OtpO09113 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.56■□□□□ 0.4
OtpO09113 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
OtpO09113 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
OtpO09113 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
OtpO09113 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
OtpO09113 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
OtpO09113 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
OtpO09113 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.55■□□□□ 0.4
OtpO09113 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
OtpO09113 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.55■□□□□ 0.4
OtpO09113 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
OtpO09113 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
OtpO09113 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
OtpO09113 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
OtpO09113 Gm43530-201ENSMUST00000195920 274 ntBASIC17.55■□□□□ 0.4
OtpO09113 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.55■□□□□ 0.4
OtpO09113 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
OtpO09113 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
OtpO09113 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
OtpO09113 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
OtpO09113 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
OtpO09113 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
OtpO09113 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
OtpO09113 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
OtpO09113 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
OtpO09113 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
OtpO09113 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.54■□□□□ 0.4
OtpO09113 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
OtpO09113 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.54■□□□□ 0.4
OtpO09113 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
OtpO09113 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
OtpO09113 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
OtpO09113 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
OtpO09113 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
OtpO09113 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
OtpO09113 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.53■□□□□ 0.4
OtpO09113 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.53■□□□□ 0.4
OtpO09113 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
OtpO09113 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
OtpO09113 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
OtpO09113 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
OtpO09113 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.52■□□□□ 0.4
OtpO09113 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
OtpO09113 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
OtpO09113 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
OtpO09113 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.52■□□□□ 0.4
OtpO09113 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.52■□□□□ 0.4
OtpO09113 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
OtpO09113 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
OtpO09113 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
OtpO09113 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
OtpO09113 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
OtpO09113 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
OtpO09113 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.51■□□□□ 0.39
OtpO09113 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OtpO09113 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
OtpO09113 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OtpO09113 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OtpO09113 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OtpO09113 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OtpO09113 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
OtpO09113 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
OtpO09113 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
OtpO09113 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.51■□□□□ 0.39
OtpO09113 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
OtpO09113 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
OtpO09113 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
OtpO09113 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
OtpO09113 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OtpO09113 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
OtpO09113 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
OtpO09113 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
OtpO09113 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
OtpO09113 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.5■□□□□ 0.39
OtpO09113 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
OtpO09113 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
OtpO09113 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
OtpO09113 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.5■□□□□ 0.39
OtpO09113 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
OtpO09113 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
OtpO09113 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
OtpO09113 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
OtpO09113 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.49■□□□□ 0.39
OtpO09113 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
OtpO09113 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
OtpO09113 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
OtpO09113 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
OtpO09113 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
OtpO09113 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.49■□□□□ 0.39
OtpO09113 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
OtpO09113 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms