Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ercc2O08811 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ercc2O08811 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ercc2O08811 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ercc2O08811 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Ercc2O08811 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Ercc2O08811 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ercc2O08811 Gm12821-201ENSMUST00000120022 600 ntBASIC20.23■□□□□ 0.83
Ercc2O08811 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.23■□□□□ 0.83
Ercc2O08811 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.23■□□□□ 0.83
Ercc2O08811 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ercc2O08811 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ercc2O08811 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.23■□□□□ 0.83
Ercc2O08811 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Ercc2O08811 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ercc2O08811 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ercc2O08811 Gm27454-201ENSMUST00000185090 204 ntBASIC20.22■□□□□ 0.83
Ercc2O08811 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ercc2O08811 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.22■□□□□ 0.83
Ercc2O08811 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Ercc2O08811 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ercc2O08811 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ercc2O08811 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.21■□□□□ 0.83
Ercc2O08811 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ercc2O08811 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ercc2O08811 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Ercc2O08811 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ercc2O08811 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Ercc2O08811 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ercc2O08811 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ercc2O08811 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ercc2O08811 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ercc2O08811 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ercc2O08811 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ercc2O08811 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ercc2O08811 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.2■□□□□ 0.82
Ercc2O08811 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ercc2O08811 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Ercc2O08811 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Ercc2O08811 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ercc2O08811 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ercc2O08811 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ercc2O08811 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ercc2O08811 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ercc2O08811 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ercc2O08811 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ercc2O08811 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.19■□□□□ 0.82
Ercc2O08811 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ercc2O08811 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ercc2O08811 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Ercc2O08811 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ercc2O08811 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Ercc2O08811 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ercc2O08811 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ercc2O08811 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Ercc2O08811 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Ercc2O08811 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ercc2O08811 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ercc2O08811 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ercc2O08811 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ercc2O08811 Gm12251-201ENSMUST00000117893 792 ntBASIC20.18■□□□□ 0.82
Ercc2O08811 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ercc2O08811 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.18■□□□□ 0.82
Ercc2O08811 Spcs1-204ENSMUST00000226782 949 ntBASIC20.18■□□□□ 0.82
Ercc2O08811 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Ercc2O08811 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Ercc2O08811 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Ercc2O08811 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ercc2O08811 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ercc2O08811 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ercc2O08811 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ercc2O08811 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ercc2O08811 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ercc2O08811 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ercc2O08811 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ercc2O08811 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.17■□□□□ 0.82
Ercc2O08811 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.17■□□□□ 0.82
Ercc2O08811 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ercc2O08811 Mir7075-201ENSMUST00000184187 82 ntBASIC20.16■□□□□ 0.82
Ercc2O08811 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.16■□□□□ 0.82
Ercc2O08811 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ercc2O08811 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Ercc2O08811 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ercc2O08811 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ercc2O08811 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ercc2O08811 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.15■□□□□ 0.82
Ercc2O08811 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ercc2O08811 Gm45417-201ENSMUST00000209533 758 ntBASIC20.15■□□□□ 0.82
Ercc2O08811 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ercc2O08811 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ercc2O08811 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ercc2O08811 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ercc2O08811 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Ercc2O08811 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ercc2O08811 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ercc2O08811 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ercc2O08811 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ercc2O08811 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.14■□□□□ 0.81
Ercc2O08811 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ercc2O08811 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms