Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Raet1bO08603 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Raet1bO08603 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Raet1bO08603 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Raet1bO08603 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Raet1bO08603 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.48■□□□□ 0.39
Raet1bO08603 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Raet1bO08603 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.48■□□□□ 0.39
Raet1bO08603 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.47■□□□□ 0.39
Raet1bO08603 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.47■□□□□ 0.39
Raet1bO08603 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Raet1bO08603 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Raet1bO08603 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Raet1bO08603 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Raet1bO08603 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Raet1bO08603 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Raet1bO08603 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.46■□□□□ 0.39
Raet1bO08603 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Raet1bO08603 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Raet1bO08603 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.46■□□□□ 0.39
Raet1bO08603 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Raet1bO08603 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Raet1bO08603 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Raet1bO08603 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Raet1bO08603 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Raet1bO08603 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Raet1bO08603 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Raet1bO08603 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Raet1bO08603 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Raet1bO08603 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.45■□□□□ 0.38
Raet1bO08603 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.45■□□□□ 0.38
Raet1bO08603 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Raet1bO08603 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.45■□□□□ 0.38
Raet1bO08603 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Raet1bO08603 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Raet1bO08603 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Raet1bO08603 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Raet1bO08603 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.44■□□□□ 0.38
Raet1bO08603 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Raet1bO08603 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.44■□□□□ 0.38
Raet1bO08603 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Raet1bO08603 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
Raet1bO08603 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Raet1bO08603 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
Raet1bO08603 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Raet1bO08603 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.44■□□□□ 0.38
Raet1bO08603 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Raet1bO08603 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Raet1bO08603 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Raet1bO08603 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Raet1bO08603 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Raet1bO08603 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Raet1bO08603 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Raet1bO08603 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Raet1bO08603 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Raet1bO08603 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Raet1bO08603 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Raet1bO08603 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Raet1bO08603 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Raet1bO08603 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Raet1bO08603 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Raet1bO08603 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Raet1bO08603 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Raet1bO08603 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Raet1bO08603 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Raet1bO08603 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Raet1bO08603 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Raet1bO08603 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Raet1bO08603 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Raet1bO08603 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Raet1bO08603 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.41■□□□□ 0.38
Raet1bO08603 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.41■□□□□ 0.38
Raet1bO08603 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Raet1bO08603 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Raet1bO08603 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Raet1bO08603 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Raet1bO08603 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Raet1bO08603 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Raet1bO08603 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Raet1bO08603 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Raet1bO08603 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Raet1bO08603 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Raet1bO08603 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Raet1bO08603 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Raet1bO08603 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Raet1bO08603 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Raet1bO08603 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Raet1bO08603 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Raet1bO08603 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Raet1bO08603 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Raet1bO08603 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.39■□□□□ 0.37
Raet1bO08603 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Raet1bO08603 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Raet1bO08603 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Raet1bO08603 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Raet1bO08603 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Raet1bO08603 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.39■□□□□ 0.37
Raet1bO08603 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Raet1bO08603 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Raet1bO08603 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms