Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp35M0QWN7 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp35M0QWN7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp35M0QWN7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp35M0QWN7 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp35M0QWN7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Usp35M0QWN7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Usp35M0QWN7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Usp35M0QWN7 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.08■□□□□ 0.96
Usp35M0QWN7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp35M0QWN7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp35M0QWN7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.07■□□□□ 0.96
Usp35M0QWN7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp35M0QWN7 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Usp35M0QWN7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp35M0QWN7 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp35M0QWN7 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp35M0QWN7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp35M0QWN7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.07■□□□□ 0.96
Usp35M0QWN7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp35M0QWN7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp35M0QWN7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp35M0QWN7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Usp35M0QWN7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp35M0QWN7 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp35M0QWN7 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp35M0QWN7 Gm29257-201ENSMUST00000186115 639 ntBASIC21.06■□□□□ 0.96
Usp35M0QWN7 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.06■□□□□ 0.96
Usp35M0QWN7 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp35M0QWN7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.06■□□□□ 0.96
Usp35M0QWN7 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Usp35M0QWN7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.06■□□□□ 0.96
Usp35M0QWN7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Usp35M0QWN7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Usp35M0QWN7 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp35M0QWN7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp35M0QWN7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp35M0QWN7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp35M0QWN7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp35M0QWN7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp35M0QWN7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Usp35M0QWN7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Usp35M0QWN7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp35M0QWN7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.05■□□□□ 0.96
Usp35M0QWN7 Gm26833-201ENSMUST00000180899 440 ntBASIC21.05■□□□□ 0.96
Usp35M0QWN7 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Usp35M0QWN7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Usp35M0QWN7 Gm5874-201ENSMUST00000096101 508 ntBASIC21.05■□□□□ 0.96
Usp35M0QWN7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Usp35M0QWN7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp35M0QWN7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.04■□□□□ 0.96
Usp35M0QWN7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp35M0QWN7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp35M0QWN7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.04■□□□□ 0.96
Usp35M0QWN7 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp35M0QWN7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp35M0QWN7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp35M0QWN7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp35M0QWN7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Usp35M0QWN7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Usp35M0QWN7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Usp35M0QWN7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.03■□□□□ 0.96
Usp35M0QWN7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.03■□□□□ 0.96
Usp35M0QWN7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp35M0QWN7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Usp35M0QWN7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp35M0QWN7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp35M0QWN7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp35M0QWN7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp35M0QWN7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Usp35M0QWN7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.02■□□□□ 0.96
Usp35M0QWN7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp35M0QWN7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Usp35M0QWN7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp35M0QWN7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Usp35M0QWN7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Usp35M0QWN7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp35M0QWN7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp35M0QWN7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.01■□□□□ 0.95
Usp35M0QWN7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.01■□□□□ 0.95
Usp35M0QWN7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp35M0QWN7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp35M0QWN7 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Usp35M0QWN7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Usp35M0QWN7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp35M0QWN7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp35M0QWN7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Usp35M0QWN7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Usp35M0QWN7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp35M0QWN7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21■□□□□ 0.95
Usp35M0QWN7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
Usp35M0QWN7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21■□□□□ 0.95
Usp35M0QWN7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp35M0QWN7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp35M0QWN7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21■□□□□ 0.95
Usp35M0QWN7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21■□□□□ 0.95
Usp35M0QWN7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp35M0QWN7 Gm10209-201ENSMUST00000203397 1607 ntBASIC21■□□□□ 0.95
Usp35M0QWN7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp35M0QWN7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms