Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.38■□□□□ 0.37
Trav13d-3J3QMG8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trav13d-3J3QMG8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trav13d-3J3QMG8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav13d-3J3QMG8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav13d-3J3QMG8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav13d-3J3QMG8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav13d-3J3QMG8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav13d-3J3QMG8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav13d-3J3QMG8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav13d-3J3QMG8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav13d-3J3QMG8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trav13d-3J3QMG8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav13d-3J3QMG8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav13d-3J3QMG8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav13d-3J3QMG8 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.37■□□□□ 0.37
Trav13d-3J3QMG8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav13d-3J3QMG8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav13d-3J3QMG8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav13d-3J3QMG8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav13d-3J3QMG8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav13d-3J3QMG8 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav13d-3J3QMG8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav13d-3J3QMG8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav13d-3J3QMG8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav13d-3J3QMG8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav13d-3J3QMG8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav13d-3J3QMG8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav13d-3J3QMG8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trav13d-3J3QMG8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav13d-3J3QMG8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav13d-3J3QMG8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav13d-3J3QMG8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav13d-3J3QMG8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav13d-3J3QMG8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav13d-3J3QMG8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav13d-3J3QMG8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav13d-3J3QMG8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav13d-3J3QMG8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.35■□□□□ 0.37
Trav13d-3J3QMG8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Trav13d-3J3QMG8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav13d-3J3QMG8 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav13d-3J3QMG8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav13d-3J3QMG8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.35■□□□□ 0.37
Trav13d-3J3QMG8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav13d-3J3QMG8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav13d-3J3QMG8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.34■□□□□ 0.37
Trav13d-3J3QMG8 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.34■□□□□ 0.37
Trav13d-3J3QMG8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav13d-3J3QMG8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav13d-3J3QMG8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Trav13d-3J3QMG8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav13d-3J3QMG8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.33■□□□□ 0.37
Trav13d-3J3QMG8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav13d-3J3QMG8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav13d-3J3QMG8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav13d-3J3QMG8 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trav13d-3J3QMG8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav13d-3J3QMG8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav13d-3J3QMG8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Trav13d-3J3QMG8 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav13d-3J3QMG8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
Trav13d-3J3QMG8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav13d-3J3QMG8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trav13d-3J3QMG8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav13d-3J3QMG8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Trav13d-3J3QMG8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav13d-3J3QMG8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.32■□□□□ 0.36
Trav13d-3J3QMG8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.32■□□□□ 0.36
Trav13d-3J3QMG8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.32■□□□□ 0.36
Trav13d-3J3QMG8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav13d-3J3QMG8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trav13d-3J3QMG8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav13d-3J3QMG8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav13d-3J3QMG8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav13d-3J3QMG8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.31■□□□□ 0.36
Trav13d-3J3QMG8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav13d-3J3QMG8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav13d-3J3QMG8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav13d-3J3QMG8 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trav13d-3J3QMG8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav13d-3J3QMG8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav13d-3J3QMG8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav13d-3J3QMG8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav13d-3J3QMG8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav13d-3J3QMG8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trav13d-3J3QMG8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav13d-3J3QMG8 Gm43137-201ENSMUST00000198052 594 ntBASIC17.3■□□□□ 0.36
Trav13d-3J3QMG8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.3■□□□□ 0.36
Trav13d-3J3QMG8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav13d-3J3QMG8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav13d-3J3QMG8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trav13d-3J3QMG8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav13d-3J3QMG8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav13d-3J3QMG8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav13d-3J3QMG8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav13d-3J3QMG8 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.29■□□□□ 0.36
Trav13d-3J3QMG8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav13d-3J3QMG8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
Trav13d-3J3QMG8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms