Protein–RNA interactions for Protein: H3BKP8

9930021J03Rik, RIKEN cDNA 9930021J03 gene, mousemouse

Predictions only

Length 2,027 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
9930021J03RikH3BKP8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
9930021J03RikH3BKP8 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.44■□□□□ 0.54
9930021J03RikH3BKP8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
9930021J03RikH3BKP8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
9930021J03RikH3BKP8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
9930021J03RikH3BKP8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
9930021J03RikH3BKP8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
9930021J03RikH3BKP8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.44■□□□□ 0.54
9930021J03RikH3BKP8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
9930021J03RikH3BKP8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
9930021J03RikH3BKP8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
9930021J03RikH3BKP8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
9930021J03RikH3BKP8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
9930021J03RikH3BKP8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
9930021J03RikH3BKP8 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.44■□□□□ 0.54
9930021J03RikH3BKP8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
9930021J03RikH3BKP8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
9930021J03RikH3BKP8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
9930021J03RikH3BKP8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
9930021J03RikH3BKP8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
9930021J03RikH3BKP8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
9930021J03RikH3BKP8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
9930021J03RikH3BKP8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
9930021J03RikH3BKP8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
9930021J03RikH3BKP8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
9930021J03RikH3BKP8 Gm8493-201ENSMUST00000196881 489 ntBASIC18.43■□□□□ 0.54
9930021J03RikH3BKP8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
9930021J03RikH3BKP8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
9930021J03RikH3BKP8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
9930021J03RikH3BKP8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
9930021J03RikH3BKP8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.42■□□□□ 0.54
9930021J03RikH3BKP8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
9930021J03RikH3BKP8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
9930021J03RikH3BKP8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
9930021J03RikH3BKP8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
9930021J03RikH3BKP8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
9930021J03RikH3BKP8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
9930021J03RikH3BKP8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
9930021J03RikH3BKP8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
9930021J03RikH3BKP8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
9930021J03RikH3BKP8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
9930021J03RikH3BKP8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
9930021J03RikH3BKP8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
9930021J03RikH3BKP8 Gm40848-201ENSMUST00000221998 324 ntBASIC18.41■□□□□ 0.54
9930021J03RikH3BKP8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
9930021J03RikH3BKP8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
9930021J03RikH3BKP8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
9930021J03RikH3BKP8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
9930021J03RikH3BKP8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
9930021J03RikH3BKP8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
9930021J03RikH3BKP8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
9930021J03RikH3BKP8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
9930021J03RikH3BKP8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
9930021J03RikH3BKP8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
9930021J03RikH3BKP8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
9930021J03RikH3BKP8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
9930021J03RikH3BKP8 Smad6-203ENSMUST00000179458 273 ntBASIC18.4■□□□□ 0.54
9930021J03RikH3BKP8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
9930021J03RikH3BKP8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
9930021J03RikH3BKP8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
9930021J03RikH3BKP8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
9930021J03RikH3BKP8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
9930021J03RikH3BKP8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
9930021J03RikH3BKP8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.4■□□□□ 0.54
9930021J03RikH3BKP8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
9930021J03RikH3BKP8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
9930021J03RikH3BKP8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
9930021J03RikH3BKP8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
9930021J03RikH3BKP8 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
9930021J03RikH3BKP8 Gm26833-201ENSMUST00000180899 440 ntBASIC18.39■□□□□ 0.53
9930021J03RikH3BKP8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
9930021J03RikH3BKP8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
9930021J03RikH3BKP8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
9930021J03RikH3BKP8 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.39■□□□□ 0.53
9930021J03RikH3BKP8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
9930021J03RikH3BKP8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.39■□□□□ 0.53
9930021J03RikH3BKP8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
9930021J03RikH3BKP8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
9930021J03RikH3BKP8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
9930021J03RikH3BKP8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
9930021J03RikH3BKP8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
9930021J03RikH3BKP8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
9930021J03RikH3BKP8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
9930021J03RikH3BKP8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.38■□□□□ 0.53
9930021J03RikH3BKP8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
9930021J03RikH3BKP8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
9930021J03RikH3BKP8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
9930021J03RikH3BKP8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
9930021J03RikH3BKP8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
9930021J03RikH3BKP8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
9930021J03RikH3BKP8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
9930021J03RikH3BKP8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
9930021J03RikH3BKP8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
9930021J03RikH3BKP8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
9930021J03RikH3BKP8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
9930021J03RikH3BKP8 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.37■□□□□ 0.53
9930021J03RikH3BKP8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
9930021J03RikH3BKP8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
9930021J03RikH3BKP8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
9930021J03RikH3BKP8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms