Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Gm12933-201ENSMUST00000120203 872 ntBASIC30.46■■■□□ 2.47
Pcf11G3X9Z4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC30.46■■■□□ 2.47
Pcf11G3X9Z4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Pcf11G3X9Z4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Pcf11G3X9Z4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.47
Pcf11G3X9Z4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC30.45■■■□□ 2.47
Pcf11G3X9Z4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.47
Pcf11G3X9Z4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC30.45■■■□□ 2.47
Pcf11G3X9Z4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Pcf11G3X9Z4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Pcf11G3X9Z4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Pcf11G3X9Z4 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Pcf11G3X9Z4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC30.44■■■□□ 2.46
Pcf11G3X9Z4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
Pcf11G3X9Z4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
Pcf11G3X9Z4 Gm13146-201ENSMUST00000118508 780 ntBASIC30.43■■■□□ 2.46
Pcf11G3X9Z4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
Pcf11G3X9Z4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Pcf11G3X9Z4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Pcf11G3X9Z4 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC30.42■■■□□ 2.46
Pcf11G3X9Z4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Pcf11G3X9Z4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Pcf11G3X9Z4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Pcf11G3X9Z4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Pcf11G3X9Z4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
Pcf11G3X9Z4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
Pcf11G3X9Z4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Pcf11G3X9Z4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Pcf11G3X9Z4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
Pcf11G3X9Z4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Pcf11G3X9Z4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC30.4■■■□□ 2.46
Pcf11G3X9Z4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Pcf11G3X9Z4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Pcf11G3X9Z4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Pcf11G3X9Z4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Pcf11G3X9Z4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Pcf11G3X9Z4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Pcf11G3X9Z4 Gm12669-201ENSMUST00000122162 1009 ntBASIC30.39■■■□□ 2.46
Pcf11G3X9Z4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC30.39■■■□□ 2.46
Pcf11G3X9Z4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC30.39■■■□□ 2.46
Pcf11G3X9Z4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
Pcf11G3X9Z4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC30.38■■■□□ 2.45
Pcf11G3X9Z4 Gm38205-201ENSMUST00000192243 258 ntBASIC30.38■■■□□ 2.45
Pcf11G3X9Z4 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Pcf11G3X9Z4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Pcf11G3X9Z4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC30.38■■■□□ 2.45
Pcf11G3X9Z4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
Pcf11G3X9Z4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Pcf11G3X9Z4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Pcf11G3X9Z4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Pcf11G3X9Z4 Snhg20-203ENSMUST00000182811 2153 ntBASIC30.37■■■□□ 2.45
Pcf11G3X9Z4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC30.37■■■□□ 2.45
Pcf11G3X9Z4 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC30.37■■■□□ 2.45
Pcf11G3X9Z4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Pcf11G3X9Z4 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Pcf11G3X9Z4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC30.36■■■□□ 2.45
Pcf11G3X9Z4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
Pcf11G3X9Z4 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Pcf11G3X9Z4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Pcf11G3X9Z4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
Pcf11G3X9Z4 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Pcf11G3X9Z4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
Pcf11G3X9Z4 Gm37035-201ENSMUST00000194809 2148 ntBASIC30.35■■■□□ 2.45
Pcf11G3X9Z4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC30.35■■■□□ 2.45
Pcf11G3X9Z4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Pcf11G3X9Z4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Pcf11G3X9Z4 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Pcf11G3X9Z4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Pcf11G3X9Z4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC30.34■■■□□ 2.45
Pcf11G3X9Z4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Pcf11G3X9Z4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Pcf11G3X9Z4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Pcf11G3X9Z4 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC30.33■■■□□ 2.45
Pcf11G3X9Z4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Pcf11G3X9Z4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC30.33■■■□□ 2.45
Pcf11G3X9Z4 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Pcf11G3X9Z4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Pcf11G3X9Z4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Pcf11G3X9Z4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Pcf11G3X9Z4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
Pcf11G3X9Z4 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Pcf11G3X9Z4 Gm42555-201ENSMUST00000199304 1039 ntBASIC30.32■■■□□ 2.45
Pcf11G3X9Z4 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
Pcf11G3X9Z4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC30.32■■■□□ 2.44
Pcf11G3X9Z4 Gm43909-201ENSMUST00000203443 1876 ntBASIC30.32■■■□□ 2.44
Pcf11G3X9Z4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC30.32■■■□□ 2.44
Pcf11G3X9Z4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC30.32■■■□□ 2.44
Pcf11G3X9Z4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC30.32■■■□□ 2.44
Pcf11G3X9Z4 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Pcf11G3X9Z4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC30.31■■■□□ 2.44
Pcf11G3X9Z4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
Pcf11G3X9Z4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC30.31■■■□□ 2.44
Pcf11G3X9Z4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Pcf11G3X9Z4 Gm7514-201ENSMUST00000209475 934 ntBASIC30.31■■■□□ 2.44
Pcf11G3X9Z4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
Pcf11G3X9Z4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Pcf11G3X9Z4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Pcf11G3X9Z4 Gm15043-201ENSMUST00000118843 1543 ntBASIC30.3■■■□□ 2.44
Pcf11G3X9Z4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
Pcf11G3X9Z4 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms