Protein–RNA interactions for Protein: F6VCN9

Gm5861, Predicted gene 5861 (Fragment), mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5861F6VCN9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Gm5861F6VCN9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm5861F6VCN9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gm5861F6VCN9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gm5861F6VCN9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm5861F6VCN9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gm5861F6VCN9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm5861F6VCN9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Gm5861F6VCN9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Gm5861F6VCN9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm5861F6VCN9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gm5861F6VCN9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Gm5861F6VCN9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm5861F6VCN9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Gm5861F6VCN9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.91■□□□□ 0.62
Gm5861F6VCN9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Gm5861F6VCN9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm5861F6VCN9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm5861F6VCN9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm5861F6VCN9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm5861F6VCN9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm5861F6VCN9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.9■□□□□ 0.62
Gm5861F6VCN9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.9■□□□□ 0.62
Gm5861F6VCN9 Gm22238-201ENSMUST00000175222 88 ntBASIC18.9■□□□□ 0.62
Gm5861F6VCN9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Gm5861F6VCN9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm5861F6VCN9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm5861F6VCN9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Gm5861F6VCN9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Gm5861F6VCN9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm5861F6VCN9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gm5861F6VCN9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gm5861F6VCN9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.89■□□□□ 0.61
Gm5861F6VCN9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.89■□□□□ 0.61
Gm5861F6VCN9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Gm5861F6VCN9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.89■□□□□ 0.61
Gm5861F6VCN9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm5861F6VCN9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm5861F6VCN9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gm5861F6VCN9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gm5861F6VCN9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Gm5861F6VCN9 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.88■□□□□ 0.61
Gm5861F6VCN9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Gm5861F6VCN9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm5861F6VCN9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Gm5861F6VCN9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.88■□□□□ 0.61
Gm5861F6VCN9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Gm5861F6VCN9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm5861F6VCN9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm5861F6VCN9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm5861F6VCN9 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.88■□□□□ 0.61
Gm5861F6VCN9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm5861F6VCN9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Gm5861F6VCN9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Gm5861F6VCN9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm5861F6VCN9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm5861F6VCN9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm5861F6VCN9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm5861F6VCN9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm5861F6VCN9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Gm5861F6VCN9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Gm5861F6VCN9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Gm5861F6VCN9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5861F6VCN9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Gm5861F6VCN9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5861F6VCN9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Gm5861F6VCN9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5861F6VCN9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5861F6VCN9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.86■□□□□ 0.61
Gm5861F6VCN9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5861F6VCN9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5861F6VCN9 Golph3-202ENSMUST00000226517 2359 ntBASIC18.85■□□□□ 0.61
Gm5861F6VCN9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.85■□□□□ 0.61
Gm5861F6VCN9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm5861F6VCN9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
Gm5861F6VCN9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.85■□□□□ 0.61
Gm5861F6VCN9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.85■□□□□ 0.61
Gm5861F6VCN9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm5861F6VCN9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm5861F6VCN9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm5861F6VCN9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5861F6VCN9 Mir6236-201ENSMUST00000184437 123 ntBASIC18.84■□□□□ 0.61
Gm5861F6VCN9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5861F6VCN9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Gm5861F6VCN9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5861F6VCN9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5861F6VCN9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5861F6VCN9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5861F6VCN9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5861F6VCN9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5861F6VCN9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5861F6VCN9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5861F6VCN9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.83■□□□□ 0.61
Gm5861F6VCN9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm5861F6VCN9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm5861F6VCN9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Gm5861F6VCN9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.83■□□□□ 0.61
Gm5861F6VCN9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm5861F6VCN9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Gm5861F6VCN9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms