Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ube4aE9Q735 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ube4aE9Q735 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ube4aE9Q735 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ube4aE9Q735 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ube4aE9Q735 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
Ube4aE9Q735 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ube4aE9Q735 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ube4aE9Q735 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ube4aE9Q735 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Ube4aE9Q735 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Ube4aE9Q735 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ube4aE9Q735 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC23.92■■□□□ 1.42
Ube4aE9Q735 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Ube4aE9Q735 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ube4aE9Q735 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC23.92■■□□□ 1.42
Ube4aE9Q735 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ube4aE9Q735 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ube4aE9Q735 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
Ube4aE9Q735 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
Ube4aE9Q735 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Ube4aE9Q735 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC23.91■■□□□ 1.42
Ube4aE9Q735 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC23.91■■□□□ 1.42
Ube4aE9Q735 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ube4aE9Q735 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Ube4aE9Q735 Spcs1-207ENSMUST00000228767 1008 ntBASIC23.9■■□□□ 1.42
Ube4aE9Q735 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ube4aE9Q735 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
Ube4aE9Q735 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ube4aE9Q735 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ube4aE9Q735 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ube4aE9Q735 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
Ube4aE9Q735 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ube4aE9Q735 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Ube4aE9Q735 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
Ube4aE9Q735 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ube4aE9Q735 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ube4aE9Q735 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ube4aE9Q735 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Ube4aE9Q735 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Ube4aE9Q735 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ube4aE9Q735 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ube4aE9Q735 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Ube4aE9Q735 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ube4aE9Q735 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ube4aE9Q735 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ube4aE9Q735 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
Ube4aE9Q735 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ube4aE9Q735 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Ube4aE9Q735 Gm42911-201ENSMUST00000199360 1630 ntBASIC23.86■■□□□ 1.41
Ube4aE9Q735 Gm12933-201ENSMUST00000120203 872 ntBASIC23.86■■□□□ 1.41
Ube4aE9Q735 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ube4aE9Q735 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ube4aE9Q735 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ube4aE9Q735 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC23.85■■□□□ 1.41
Ube4aE9Q735 CT030146.1-201ENSMUST00000220919 217 ntBASIC23.85■■□□□ 1.41
Ube4aE9Q735 Ap3s1-204ENSMUST00000225520 957 ntBASIC23.85■■□□□ 1.41
Ube4aE9Q735 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ube4aE9Q735 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Ube4aE9Q735 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ube4aE9Q735 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Ube4aE9Q735 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ube4aE9Q735 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ube4aE9Q735 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ube4aE9Q735 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC23.84■■□□□ 1.41
Ube4aE9Q735 CT025689.6-201ENSMUST00000224991 1104 ntBASIC23.84■■□□□ 1.41
Ube4aE9Q735 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ube4aE9Q735 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC23.84■■□□□ 1.41
Ube4aE9Q735 Gm15043-201ENSMUST00000118843 1543 ntBASIC23.84■■□□□ 1.41
Ube4aE9Q735 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC23.83■■□□□ 1.41
Ube4aE9Q735 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ube4aE9Q735 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ube4aE9Q735 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ube4aE9Q735 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ube4aE9Q735 Gm7514-201ENSMUST00000209475 934 ntBASIC23.83■■□□□ 1.41
Ube4aE9Q735 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ube4aE9Q735 Gm37035-201ENSMUST00000194809 2148 ntBASIC23.83■■□□□ 1.4
Ube4aE9Q735 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC23.82■■□□□ 1.4
Ube4aE9Q735 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ube4aE9Q735 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Ube4aE9Q735 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ube4aE9Q735 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC23.82■■□□□ 1.4
Ube4aE9Q735 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Ube4aE9Q735 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC23.82■■□□□ 1.4
Ube4aE9Q735 AC154266.1-201ENSMUST00000223190 503 ntBASIC23.82■■□□□ 1.4
Ube4aE9Q735 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ube4aE9Q735 Gm10602-201ENSMUST00000098239 609 ntBASIC23.82■■□□□ 1.4
Ube4aE9Q735 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ube4aE9Q735 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC23.82■■□□□ 1.4
Ube4aE9Q735 Cdkn3-203ENSMUST00000227149 1952 ntBASIC23.82■■□□□ 1.4
Ube4aE9Q735 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Ube4aE9Q735 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ube4aE9Q735 AA386476-201ENSMUST00000098781 1665 ntBASIC23.81■■□□□ 1.4
Ube4aE9Q735 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ube4aE9Q735 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC23.81■■□□□ 1.4
Ube4aE9Q735 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Ube4aE9Q735 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ube4aE9Q735 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ube4aE9Q735 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ube4aE9Q735 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms