Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.88■□□□□ 0.93
Scn1aA2APX8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn1aA2APX8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn1aA2APX8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
Scn1aA2APX8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn1aA2APX8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn1aA2APX8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Scn1aA2APX8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn1aA2APX8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn1aA2APX8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Scn1aA2APX8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn1aA2APX8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Scn1aA2APX8 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.87■□□□□ 0.93
Scn1aA2APX8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Scn1aA2APX8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn1aA2APX8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn1aA2APX8 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.87■□□□□ 0.93
Scn1aA2APX8 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.87■□□□□ 0.93
Scn1aA2APX8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn1aA2APX8 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.87■□□□□ 0.93
Scn1aA2APX8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn1aA2APX8 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn1aA2APX8 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.86■□□□□ 0.93
Scn1aA2APX8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn1aA2APX8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Scn1aA2APX8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.86■□□□□ 0.93
Scn1aA2APX8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.86■□□□□ 0.93
Scn1aA2APX8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Scn1aA2APX8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn1aA2APX8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn1aA2APX8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scn1aA2APX8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scn1aA2APX8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scn1aA2APX8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Scn1aA2APX8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scn1aA2APX8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.85■□□□□ 0.93
Scn1aA2APX8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scn1aA2APX8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Scn1aA2APX8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Scn1aA2APX8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn1aA2APX8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn1aA2APX8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn1aA2APX8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Scn1aA2APX8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn1aA2APX8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scn1aA2APX8 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.83■□□□□ 0.93
Scn1aA2APX8 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.83■□□□□ 0.93
Scn1aA2APX8 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.83■□□□□ 0.93
Scn1aA2APX8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scn1aA2APX8 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.83■□□□□ 0.93
Scn1aA2APX8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Scn1aA2APX8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scn1aA2APX8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Scn1aA2APX8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scn1aA2APX8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.83■□□□□ 0.92
Scn1aA2APX8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Scn1aA2APX8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Scn1aA2APX8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Scn1aA2APX8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn1aA2APX8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Scn1aA2APX8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Scn1aA2APX8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn1aA2APX8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn1aA2APX8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn1aA2APX8 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn1aA2APX8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.82■□□□□ 0.92
Scn1aA2APX8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.82■□□□□ 0.92
Scn1aA2APX8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn1aA2APX8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Scn1aA2APX8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn1aA2APX8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn1aA2APX8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.81■□□□□ 0.92
Scn1aA2APX8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn1aA2APX8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Scn1aA2APX8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn1aA2APX8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Scn1aA2APX8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.81■□□□□ 0.92
Scn1aA2APX8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn1aA2APX8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn1aA2APX8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn1aA2APX8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn1aA2APX8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Scn1aA2APX8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn1aA2APX8 Gm5874-201ENSMUST00000096101 508 ntBASIC20.8■□□□□ 0.92
Scn1aA2APX8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Scn1aA2APX8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn1aA2APX8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn1aA2APX8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn1aA2APX8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Scn1aA2APX8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Scn1aA2APX8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.8■□□□□ 0.92
Scn1aA2APX8 Gm10033-202ENSMUST00000211874 928 ntBASIC20.8■□□□□ 0.92
Scn1aA2APX8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn1aA2APX8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn1aA2APX8 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Scn1aA2APX8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.79■□□□□ 0.92
Scn1aA2APX8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Scn1aA2APX8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.79■□□□□ 0.92
Scn1aA2APX8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Scn1aA2APX8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms