Protein–RNA interactions for Protein: A0A140T8Q0

Igkv3-3, Immunoglobulin kappa variable 3-3 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-3A0A140T8Q0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv3-3A0A140T8Q0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv3-3A0A140T8Q0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Igkv3-3A0A140T8Q0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv3-3A0A140T8Q0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Igkv3-3A0A140T8Q0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv3-3A0A140T8Q0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Igkv3-3A0A140T8Q0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv3-3A0A140T8Q0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv3-3A0A140T8Q0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv3-3A0A140T8Q0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Igkv3-3A0A140T8Q0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Igkv3-3A0A140T8Q0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC11.9□□□□□ -0.5
Igkv3-3A0A140T8Q0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv3-3A0A140T8Q0 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Igkv3-3A0A140T8Q0 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Igkv3-3A0A140T8Q0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.51
Igkv3-3A0A140T8Q0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv3-3A0A140T8Q0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC11.89□□□□□ -0.51
Igkv3-3A0A140T8Q0 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv3-3A0A140T8Q0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv3-3A0A140T8Q0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv3-3A0A140T8Q0 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv3-3A0A140T8Q0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Igkv3-3A0A140T8Q0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv3-3A0A140T8Q0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv3-3A0A140T8Q0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv3-3A0A140T8Q0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv3-3A0A140T8Q0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv3-3A0A140T8Q0 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igkv3-3A0A140T8Q0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv3-3A0A140T8Q0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv3-3A0A140T8Q0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Igkv3-3A0A140T8Q0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv3-3A0A140T8Q0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv3-3A0A140T8Q0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv3-3A0A140T8Q0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv3-3A0A140T8Q0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC11.88□□□□□ -0.51
Igkv3-3A0A140T8Q0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Igkv3-3A0A140T8Q0 Gm5131-201ENSMUST00000212776 1238 ntBASIC11.88□□□□□ -0.51
Igkv3-3A0A140T8Q0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv3-3A0A140T8Q0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv3-3A0A140T8Q0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv3-3A0A140T8Q0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv3-3A0A140T8Q0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv3-3A0A140T8Q0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv3-3A0A140T8Q0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv3-3A0A140T8Q0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv3-3A0A140T8Q0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv3-3A0A140T8Q0 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv3-3A0A140T8Q0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv3-3A0A140T8Q0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC11.88□□□□□ -0.51
Igkv3-3A0A140T8Q0 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv3-3A0A140T8Q0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv3-3A0A140T8Q0 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv3-3A0A140T8Q0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv3-3A0A140T8Q0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv3-3A0A140T8Q0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv3-3A0A140T8Q0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv3-3A0A140T8Q0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Igkv3-3A0A140T8Q0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv3-3A0A140T8Q0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv3-3A0A140T8Q0 Ptprs-211ENSMUST00000223859 5588 ntBASIC11.87□□□□□ -0.51
Igkv3-3A0A140T8Q0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv3-3A0A140T8Q0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv3-3A0A140T8Q0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC11.87□□□□□ -0.51
Igkv3-3A0A140T8Q0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC11.87□□□□□ -0.51
Igkv3-3A0A140T8Q0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv3-3A0A140T8Q0 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv3-3A0A140T8Q0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC11.87□□□□□ -0.51
Igkv3-3A0A140T8Q0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv3-3A0A140T8Q0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Igkv3-3A0A140T8Q0 Gm38342-201ENSMUST00000195710 2980 ntBASIC11.87□□□□□ -0.51
Igkv3-3A0A140T8Q0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv3-3A0A140T8Q0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv3-3A0A140T8Q0 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv3-3A0A140T8Q0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv3-3A0A140T8Q0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv3-3A0A140T8Q0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC11.86□□□□□ -0.51
Igkv3-3A0A140T8Q0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv3-3A0A140T8Q0 Golph3-202ENSMUST00000226517 2359 ntBASIC11.86□□□□□ -0.51
Igkv3-3A0A140T8Q0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv3-3A0A140T8Q0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv3-3A0A140T8Q0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv3-3A0A140T8Q0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv3-3A0A140T8Q0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv3-3A0A140T8Q0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC11.86□□□□□ -0.51
Igkv3-3A0A140T8Q0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC11.86□□□□□ -0.51
Igkv3-3A0A140T8Q0 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv3-3A0A140T8Q0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv3-3A0A140T8Q0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv3-3A0A140T8Q0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv3-3A0A140T8Q0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv3-3A0A140T8Q0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv3-3A0A140T8Q0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv3-3A0A140T8Q0 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv3-3A0A140T8Q0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv3-3A0A140T8Q0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv3-3A0A140T8Q0 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv3-3A0A140T8Q0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms