Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trbv29A0A0G2LB96 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.37■□□□□ 0.21
Trbv29A0A0G2LB96 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.37■□□□□ 0.21
Trbv29A0A0G2LB96 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.37■□□□□ 0.21
Trbv29A0A0G2LB96 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv29A0A0G2LB96 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv29A0A0G2LB96 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv29A0A0G2LB96 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv29A0A0G2LB96 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trbv29A0A0G2LB96 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv29A0A0G2LB96 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv29A0A0G2LB96 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv29A0A0G2LB96 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.36■□□□□ 0.21
Trbv29A0A0G2LB96 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv29A0A0G2LB96 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.36■□□□□ 0.21
Trbv29A0A0G2LB96 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trbv29A0A0G2LB96 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv29A0A0G2LB96 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv29A0A0G2LB96 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv29A0A0G2LB96 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv29A0A0G2LB96 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv29A0A0G2LB96 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv29A0A0G2LB96 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv29A0A0G2LB96 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv29A0A0G2LB96 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv29A0A0G2LB96 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.35■□□□□ 0.21
Trbv29A0A0G2LB96 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.35■□□□□ 0.21
Trbv29A0A0G2LB96 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv29A0A0G2LB96 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv29A0A0G2LB96 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Trbv29A0A0G2LB96 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv29A0A0G2LB96 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv29A0A0G2LB96 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv29A0A0G2LB96 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Trbv29A0A0G2LB96 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.34■□□□□ 0.21
Trbv29A0A0G2LB96 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv29A0A0G2LB96 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.34■□□□□ 0.21
Trbv29A0A0G2LB96 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.34■□□□□ 0.21
Trbv29A0A0G2LB96 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv29A0A0G2LB96 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv29A0A0G2LB96 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv29A0A0G2LB96 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv29A0A0G2LB96 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv29A0A0G2LB96 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv29A0A0G2LB96 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trbv29A0A0G2LB96 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trbv29A0A0G2LB96 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv29A0A0G2LB96 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv29A0A0G2LB96 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv29A0A0G2LB96 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv29A0A0G2LB96 Gm43530-201ENSMUST00000195920 274 ntBASIC16.33■□□□□ 0.2
Trbv29A0A0G2LB96 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv29A0A0G2LB96 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv29A0A0G2LB96 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv29A0A0G2LB96 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.32■□□□□ 0.2
Trbv29A0A0G2LB96 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trbv29A0A0G2LB96 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Trbv29A0A0G2LB96 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Trbv29A0A0G2LB96 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv29A0A0G2LB96 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv29A0A0G2LB96 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.32■□□□□ 0.2
Trbv29A0A0G2LB96 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv29A0A0G2LB96 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv29A0A0G2LB96 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv29A0A0G2LB96 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv29A0A0G2LB96 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv29A0A0G2LB96 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv29A0A0G2LB96 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trbv29A0A0G2LB96 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv29A0A0G2LB96 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv29A0A0G2LB96 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trbv29A0A0G2LB96 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.31■□□□□ 0.2
Trbv29A0A0G2LB96 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trbv29A0A0G2LB96 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv29A0A0G2LB96 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trbv29A0A0G2LB96 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.3■□□□□ 0.2
Trbv29A0A0G2LB96 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv29A0A0G2LB96 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv29A0A0G2LB96 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv29A0A0G2LB96 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv29A0A0G2LB96 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv29A0A0G2LB96 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv29A0A0G2LB96 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv29A0A0G2LB96 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv29A0A0G2LB96 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv29A0A0G2LB96 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv29A0A0G2LB96 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv29A0A0G2LB96 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trbv29A0A0G2LB96 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv29A0A0G2LB96 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv29A0A0G2LB96 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv29A0A0G2LB96 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv29A0A0G2LB96 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv29A0A0G2LB96 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv29A0A0G2LB96 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv29A0A0G2LB96 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.29■□□□□ 0.2
Trbv29A0A0G2LB96 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv29A0A0G2LB96 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv29A0A0G2LB96 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.28■□□□□ 0.2
Trbv29A0A0G2LB96 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms