Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13n-4A0A0G2JG01 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13n-4A0A0G2JG01 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13n-4A0A0G2JG01 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13n-4A0A0G2JG01 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13n-4A0A0G2JG01 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13n-4A0A0G2JG01 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13n-4A0A0G2JG01 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13n-4A0A0G2JG01 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13n-4A0A0G2JG01 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13n-4A0A0G2JG01 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.93■□□□□ 0.14
Trav13n-4A0A0G2JG01 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
Trav13n-4A0A0G2JG01 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trav13n-4A0A0G2JG01 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13n-4A0A0G2JG01 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.92■□□□□ 0.14
Trav13n-4A0A0G2JG01 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13n-4A0A0G2JG01 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13n-4A0A0G2JG01 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13n-4A0A0G2JG01 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13n-4A0A0G2JG01 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.92■□□□□ 0.14
Trav13n-4A0A0G2JG01 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13n-4A0A0G2JG01 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13n-4A0A0G2JG01 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13n-4A0A0G2JG01 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Trav13n-4A0A0G2JG01 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.92■□□□□ 0.14
Trav13n-4A0A0G2JG01 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13n-4A0A0G2JG01 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13n-4A0A0G2JG01 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13n-4A0A0G2JG01 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13n-4A0A0G2JG01 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Trav13n-4A0A0G2JG01 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13n-4A0A0G2JG01 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13n-4A0A0G2JG01 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trav13n-4A0A0G2JG01 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.91■□□□□ 0.14
Trav13n-4A0A0G2JG01 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13n-4A0A0G2JG01 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13n-4A0A0G2JG01 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13n-4A0A0G2JG01 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trav13n-4A0A0G2JG01 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13n-4A0A0G2JG01 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13n-4A0A0G2JG01 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13n-4A0A0G2JG01 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13n-4A0A0G2JG01 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trav13n-4A0A0G2JG01 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav13n-4A0A0G2JG01 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13n-4A0A0G2JG01 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13n-4A0A0G2JG01 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Trav13n-4A0A0G2JG01 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC15.9■□□□□ 0.14
Trav13n-4A0A0G2JG01 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trav13n-4A0A0G2JG01 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Trav13n-4A0A0G2JG01 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav13n-4A0A0G2JG01 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13n-4A0A0G2JG01 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13n-4A0A0G2JG01 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13n-4A0A0G2JG01 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13n-4A0A0G2JG01 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13n-4A0A0G2JG01 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13n-4A0A0G2JG01 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trav13n-4A0A0G2JG01 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13n-4A0A0G2JG01 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13n-4A0A0G2JG01 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13n-4A0A0G2JG01 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC15.89■□□□□ 0.13
Trav13n-4A0A0G2JG01 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC15.89■□□□□ 0.13
Trav13n-4A0A0G2JG01 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13n-4A0A0G2JG01 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13n-4A0A0G2JG01 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trav13n-4A0A0G2JG01 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.89■□□□□ 0.13
Trav13n-4A0A0G2JG01 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.89■□□□□ 0.13
Trav13n-4A0A0G2JG01 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trav13n-4A0A0G2JG01 Gm9870-201ENSMUST00000063874 645 ntBASIC15.89■□□□□ 0.13
Trav13n-4A0A0G2JG01 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav13n-4A0A0G2JG01 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13n-4A0A0G2JG01 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trav13n-4A0A0G2JG01 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13n-4A0A0G2JG01 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13n-4A0A0G2JG01 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13n-4A0A0G2JG01 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13n-4A0A0G2JG01 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13n-4A0A0G2JG01 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13n-4A0A0G2JG01 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav13n-4A0A0G2JG01 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13n-4A0A0G2JG01 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC15.88■□□□□ 0.13
Trav13n-4A0A0G2JG01 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Trav13n-4A0A0G2JG01 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13n-4A0A0G2JG01 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav13n-4A0A0G2JG01 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13n-4A0A0G2JG01 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav13n-4A0A0G2JG01 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13n-4A0A0G2JG01 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13n-4A0A0G2JG01 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13n-4A0A0G2JG01 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13n-4A0A0G2JG01 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trav13n-4A0A0G2JG01 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13n-4A0A0G2JG01 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13n-4A0A0G2JG01 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13n-4A0A0G2JG01 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav13n-4A0A0G2JG01 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13n-4A0A0G2JG01 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13n-4A0A0G2JG01 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13n-4A0A0G2JG01 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms