Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.31■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Gm5874-201ENSMUST00000096101 508 ntBASIC20.31■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.31■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Igkv5-43A0A0B4J1J2 AA386476-201ENSMUST00000098781 1665 ntBASIC20.3■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Igkv5-43A0A0B4J1J2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.27■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Igkv5-43A0A0B4J1J2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.27■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Gm27801-201ENSMUST00000184174 223 ntBASIC20.27■□□□□ 0.84
Igkv5-43A0A0B4J1J2 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.27■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Igkv5-43A0A0B4J1J2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.27■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Igkv5-43A0A0B4J1J2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.26■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Igkv5-43A0A0B4J1J2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.26■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Igkv5-43A0A0B4J1J2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.26■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.25■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Igkv5-43A0A0B4J1J2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.25■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.25■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Igkv5-43A0A0B4J1J2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.24■□□□□ 0.83
Igkv5-43A0A0B4J1J2 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.24■□□□□ 0.83
Igkv5-43A0A0B4J1J2 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.24■□□□□ 0.83
Igkv5-43A0A0B4J1J2 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.24■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.23■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.23■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.23■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Igkv5-43A0A0B4J1J2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Igkv5-43A0A0B4J1J2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.21■□□□□ 0.83
Igkv5-43A0A0B4J1J2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms