Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv20A0A0B4J1H5 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv20A0A0B4J1H5 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv20A0A0B4J1H5 Gm7332-201ENSMUST00000118351 454 ntBASIC17.64■□□□□ 0.41
Trbv20A0A0B4J1H5 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv20A0A0B4J1H5 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.64■□□□□ 0.41
Trbv20A0A0B4J1H5 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trbv20A0A0B4J1H5 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv20A0A0B4J1H5 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Trbv20A0A0B4J1H5 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv20A0A0B4J1H5 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv20A0A0B4J1H5 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv20A0A0B4J1H5 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trbv20A0A0B4J1H5 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv20A0A0B4J1H5 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv20A0A0B4J1H5 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv20A0A0B4J1H5 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trbv20A0A0B4J1H5 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv20A0A0B4J1H5 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv20A0A0B4J1H5 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Trbv20A0A0B4J1H5 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv20A0A0B4J1H5 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv20A0A0B4J1H5 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.63■□□□□ 0.41
Trbv20A0A0B4J1H5 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv20A0A0B4J1H5 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv20A0A0B4J1H5 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv20A0A0B4J1H5 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trbv20A0A0B4J1H5 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv20A0A0B4J1H5 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv20A0A0B4J1H5 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.63■□□□□ 0.41
Trbv20A0A0B4J1H5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv20A0A0B4J1H5 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv20A0A0B4J1H5 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trbv20A0A0B4J1H5 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.62■□□□□ 0.41
Trbv20A0A0B4J1H5 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv20A0A0B4J1H5 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv20A0A0B4J1H5 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv20A0A0B4J1H5 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv20A0A0B4J1H5 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Trbv20A0A0B4J1H5 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv20A0A0B4J1H5 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv20A0A0B4J1H5 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv20A0A0B4J1H5 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Trbv20A0A0B4J1H5 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trbv20A0A0B4J1H5 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv20A0A0B4J1H5 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv20A0A0B4J1H5 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trbv20A0A0B4J1H5 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv20A0A0B4J1H5 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv20A0A0B4J1H5 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv20A0A0B4J1H5 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv20A0A0B4J1H5 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv20A0A0B4J1H5 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv20A0A0B4J1H5 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.61■□□□□ 0.41
Trbv20A0A0B4J1H5 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv20A0A0B4J1H5 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv20A0A0B4J1H5 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.61■□□□□ 0.41
Trbv20A0A0B4J1H5 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv20A0A0B4J1H5 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trbv20A0A0B4J1H5 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.61■□□□□ 0.41
Trbv20A0A0B4J1H5 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv20A0A0B4J1H5 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv20A0A0B4J1H5 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv20A0A0B4J1H5 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv20A0A0B4J1H5 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv20A0A0B4J1H5 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv20A0A0B4J1H5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv20A0A0B4J1H5 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.6■□□□□ 0.41
Trbv20A0A0B4J1H5 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv20A0A0B4J1H5 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv20A0A0B4J1H5 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv20A0A0B4J1H5 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.6■□□□□ 0.41
Trbv20A0A0B4J1H5 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv20A0A0B4J1H5 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv20A0A0B4J1H5 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv20A0A0B4J1H5 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv20A0A0B4J1H5 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv20A0A0B4J1H5 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.59■□□□□ 0.41
Trbv20A0A0B4J1H5 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.59■□□□□ 0.41
Trbv20A0A0B4J1H5 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv20A0A0B4J1H5 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv20A0A0B4J1H5 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trbv20A0A0B4J1H5 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trbv20A0A0B4J1H5 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trbv20A0A0B4J1H5 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.58■□□□□ 0.4
Trbv20A0A0B4J1H5 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.58■□□□□ 0.4
Trbv20A0A0B4J1H5 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv20A0A0B4J1H5 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv20A0A0B4J1H5 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv20A0A0B4J1H5 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Trbv20A0A0B4J1H5 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trbv20A0A0B4J1H5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv20A0A0B4J1H5 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv20A0A0B4J1H5 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv20A0A0B4J1H5 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv20A0A0B4J1H5 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Trbv20A0A0B4J1H5 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv20A0A0B4J1H5 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv20A0A0B4J1H5 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv20A0A0B4J1H5 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms